RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 KIF17Q9P2E2 1029 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 C15orf41Q9Y2V0 281 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 CNTRLQ7Z7A1 2325 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 CDC40O60508 579 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG1-208ENST00000563448 WISP1O95388 367 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 NUDT14O95848 222 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 WDPCPO95876 746 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ADRB1P08588 477 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 POU2F1P14859 743 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 UQCRBP14927 111 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 IGFBP5P24593 272 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 MSX1P28360 303 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 CCL11P51671 97 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 OC90Q02509 493 aaPredicted RBP9.25□□□□□ -0.93
SMG1-208ENST00000563448 KCNAB2Q13303 367 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 QPRTQ15274 297 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 C6orf52Q5T4I8 152 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 SPINK14Q6IE38 97 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 C1orf94Q6P1W5 598 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ZNF730Q6ZMV8 503 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 MBOAT2Q6ZWT7 520 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ZER1Q7Z7L7 766 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 GALNT5Q7Z7M9 940 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ATG4DQ86TL0 474 aaPredicted RBP9.25□□□□□ -0.93
SMG1-208ENST00000563448 LINC00471Q8N535 108 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 PSD4Q8NDX1 1056 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 OR2M3Q8NG83 312 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 DNAJA4Q8WW22 397 aaPredicted RBP9.25□□□□□ -0.93
SMG1-208ENST00000563448 TMEM239Q8WW34 195 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 SIGLEC12Q96PQ1 595 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 MBOAT4Q96T53 435 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ZNF426Q9BUY5 554 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 DSN1Q9H410 356 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ZNF552Q9H707 407 aaPredicted RBP9.25□□□□□ -0.93
SMG1-208ENST00000563448 KRT84Q9NSB2 600 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 PLA2G3Q9NZ20 509 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 LRFN1Q9P244 771 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 ABI3Q9P2A4 366 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 DKK4Q9UBT3 224 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 MGAT4BQ9UQ53 548 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 AP4B1Q9Y6B7 739 aa9.25□□□□□ -0.93
SMG1-208ENST00000563448 A0A087WUJ7 227 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ANKRD33BA6NCL7 494 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 G3V3Y1 287 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 GNB5O14775 395 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 NEURL1O76050 574 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 P04436 131 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SLC1A3P43003 542 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 OMPP47874 163 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 HSPA13P48723 471 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SUMO3P55854 103 aaPredicted RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 MERTKQ12866 999 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 AGAP7PQ5VUJ5 663 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ISLR2Q6UXK2 745 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 MEX3DQ86XN8 651 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 NRMQ8IXM6 262 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 FADS6Q8N9I5 356 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 PFN4Q8NHR9 129 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 MPP4Q96JB8 637 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RDH12Q96NR8 316 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 AGAP4Q96P64 663 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 NPAS1Q99742 590 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 GPA33Q99795 319 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 UTP23Q9BRU9 249 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 ADI1Q9BV57 179 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 DGCR6LQ9BY27 220 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TOR3AQ9H497 397 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SACM1LQ9NTJ5 587 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TAS2R10Q9NYW0 307 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 FBXL2Q9UKC9 423 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RAB26Q9ULW5 256 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 POFUT2Q9Y2G5 429 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 KCNMB2Q9Y691 235 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 A0A0G2JMM0 328 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 A0A1W2PPB8 328 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 A0A1W2PRS3 328 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 KIR3DP1A8MWS1 328 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SNPHO15079 494 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ADAP00813 363 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 GP1BBP13224 206 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TACR3P29371 465 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 POLR2IP36954 125 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 EIF2S3P41091 472 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 CASRP41180 1078 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 DNASE1L1P49184 302 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RAD23AP54725 363 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ADARB1P78563 741 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 MFAP5Q13361 173 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TAF11Q15544 211 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RFX4Q33E94 735 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SLC36A3Q495N2 470 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TTC33Q6PID6 262 aaPredicted RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 KLHL17Q6TDP4 642 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ARSKQ6UWY0 536 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RRM2BQ7LG56 351 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 FDCSPQ8NFU4 85 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms