RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KIR2DL3P43628 341 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 SELENBP1Q13228 472 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 RPS26P11Q5JNZ5 115 aaPredicted RBP25.34■■□□□ 1.65
NME3-203ENST00000563367 ZZZ3Q8IYH5 903 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 ARFGAP2Q8N6H7 521 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 WDR60Q8WVS4 1066 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 PMM1Q92871 262 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 TMEM19Q96HH6 336 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 LURAP1Q96LR2 239 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 SRXN1Q9BYN0 137 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 RABEP2Q9H5N1 569 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 COQ10BQ9H8M1 238 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 FGFR1OP2Q9NVK5 253 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 DNAJB12Q9NXW2 375 aaKnown RBP25.34■■□□□ 1.65
NME3-203ENST00000563367 GALNT8Q9NY28 637 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 CRIM1Q9NZV1 1036 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 VAPAQ9P0L0 249 aa25.34■■□□□ 1.65
NME3-203ENST00000563367 MCTS1Q9ULC4 181 aaKnown RBP25.34■■□□□ 1.65
NME3-203ENST00000563367 A0A1W2PP18 115 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 SYNGR4O95473 234 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 DBIP07108 87 aaKnown RBP25.33■■□□□ 1.65
NME3-203ENST00000563367 NID1P14543 1247 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 IL7RP16871 459 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 GUCY1A3Q02108 690 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 PDSS1Q5T2R2 415 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 PLEKHM3Q6ZWE6 761 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 VRK2Q86Y07 508 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 CMIPQ8IY22 773 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 TMEM234Q8WY98 164 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 TMEM120AQ9BXJ8 343 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 SLC24A3Q9HC58 644 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 CLEC4AQ9UMR7 237 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 TRIM33Q9UPN9 1127 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 CSMD1Q96PZ7 3565 aa25.33■■□□□ 1.65
NME3-203ENST00000563367 CREBBPQ92793 2442 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 CSMD2Q7Z408 3487 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 TRBV5-3A0A0A0MS03 114 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 GJE1A6NN92 205 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 AP3D1O14617 1153 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 SMNDC1O75940 238 aaKnown RBP eCLIP25.32■■□□□ 1.64
NME3-203ENST00000563367 CGAP01215 116 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 BMP2P12643 396 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 CPA2P48052 419 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 CRISP3P54108 245 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 MERTKQ12866 999 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 HSP90B2PQ58FF3 399 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 MRPL2Q5T653 305 aaKnown RBP25.32■■□□□ 1.64
NME3-203ENST00000563367 CGB2Q6NT52 195 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 PEX5LQ8IYB4 626 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 C10orf111Q8N326 155 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 ROBO4Q8WZ75 1007 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 MAL2Q969L2 176 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 OPN3Q9H1Y3 402 aaPredicted RBP25.32■■□□□ 1.64
NME3-203ENST00000563367 RAD21L1Q9H4I0 556 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 RLIMQ9NVW2 624 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 THUMPD1Q9NXG2 353 aaKnown RBP25.32■■□□□ 1.64
NME3-203ENST00000563367 CALML5Q9NZT1 146 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 POLQO75417 2590 aa25.32■■□□□ 1.64
NME3-203ENST00000563367 A0A1W2PNR3 127 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 MSTNO14793 375 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 PEX19P40855 299 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 SF3A3Q12874 501 aaKnown RBP eCLIP25.31■■□□□ 1.64
NME3-203ENST00000563367 FADDQ13158 208 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 ZNF239Q16600 458 aaKnown RBP25.31■■□□□ 1.64
NME3-203ENST00000563367 LSRQ86X29 649 aaPredicted RBP25.31■■□□□ 1.64
NME3-203ENST00000563367 KIF18BQ86Y91 864 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 OR52P1PQ8NH57 321 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 ZNF563Q8TA94 476 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 IKZF5Q9H5V7 419 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 A4GALTQ9NPC4 353 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 MED4Q9NPJ6 270 aa25.31■■□□□ 1.64
NME3-203ENST00000563367 IDH2P48735 452 aaKnown RBP25.3■■□□□ 1.64
NME3-203ENST00000563367 SORDQ00796 357 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 ZNF474Q6S9Z5 364 aaPredicted RBP25.3■■□□□ 1.64
NME3-203ENST00000563367 DLEU7Q6UYE1 221 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 ZNF836Q6ZNA1 936 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 FAM214BQ7L5A3 538 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 LINC01560Q8TB33 94 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 GMPPAQ96IJ6 420 aaPredicted RBP25.3■■□□□ 1.64
NME3-203ENST00000563367 CCDC106Q9BWC9 280 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 CTPS2Q9NRF8 586 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 GMEB1Q9Y692 573 aa25.3■■□□□ 1.64
NME3-203ENST00000563367 FREM1Q5H8C1 2179 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 A0A0G2JPF8 293 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 HNRNPCL2B2RXH8 293 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 HNRNPCL3B7ZW38 293 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 HNRNPCL1O60812 293 aaKnown RBP25.29■■□□□ 1.64
NME3-203ENST00000563367 VIMP08670 466 aaKnown RBP25.29■■□□□ 1.64
NME3-203ENST00000563367 HNRNPCL4P0DMR1 293 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 CPOXP36551 454 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 GNA13Q14344 377 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 METTL21CQ5VZV1 264 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 C3orf33Q6P1S2 294 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 RETREG3Q86VR2 466 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 ZNF610Q8N9Z0 462 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 CPNE4Q96A23 557 aaPredicted RBP25.29■■□□□ 1.64
NME3-203ENST00000563367 TIGARQ9NQ88 270 aa25.29■■□□□ 1.64
NME3-203ENST00000563367 CDHR4A6H8M9 788 aa25.28■■□□□ 1.64
NME3-203ENST00000563367 TMEM247A6NEH6 219 aa25.28■■□□□ 1.64
NME3-203ENST00000563367 TUBAL3A6NHL2 446 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms