RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ZNF223Q9UK11 482 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 MRTO4Q9UKD2 239 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 SLC35A3Q9Y2D2 325 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 GMPPBQ9Y5P6 360 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 B3GALT1Q9Y5Z6 326 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 NF1P21359 2839 aa6.9□□□□□ -1.31
TPM1-231ENST00000561395 A0A087WUU8 490 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 LOC102723996A0A087X1L8 192 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 TRIM64A6NGJ6 449 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 C9orf172C9J069 976 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 TSPAN2O60636 221 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 STK17BO94768 372 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 SEC24DO94855 1032 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 LYPD3O95274 346 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 DLGAP3O95886 979 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 UMODP07911 640 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 POU2F1P14859 743 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 GNLYP22749 145 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 MMP11P24347 488 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 IL12BP29460 328 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 KRT20P35900 424 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 GGT2P36268 569 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 IFNGR2P38484 337 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ADH7P40394 386 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ACAA2P42765 397 aaKnown RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 NR0B1P51843 470 aaKnown RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 MLLT10P55197 1068 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 NUP107P57740 925 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ISL1P61371 349 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ESRRGP62508 458 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 RNF4P78317 190 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 RPP38P78345 283 aaKnown RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 CD47Q08722 323 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 FOXD4Q12950 439 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 RAPSNQ13702 412 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 OR1Q1Q15612 314 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 RBM48Q5RL73 367 aaKnown RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 FAM199XQ6PEV8 388 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 ZNF613Q6PF04 617 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 CD300LDQ6UXZ3 194 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 HSDL2Q6YN16 418 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ZNF730Q6ZMV8 503 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 ZNF550Q7Z398 422 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ZER1Q7Z7L7 766 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 CCDC71Q8IV32 467 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 NKAIN4Q8IVV8 208 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 PRR22Q8IZ63 422 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 FAM71CQ8NEG0 241 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 OR2Y1Q8NGV0 311 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 OR4C3Q8NH37 302 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 OR8K3Q8NH51 312 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 NUBPLQ8TB37 319 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 PIGXQ8TBF5 258 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 ACOT11Q8WXI4 607 aaPredicted RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 HDAC2Q92769 488 aaKnown RBP6.89□□□□□ -1.31
TPM1-231ENST00000561395 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 OMA1Q96E52 524 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 VMP1Q96GC9 406 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 HRASLS5Q96KN8 279 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 TAAR9Q96RI9 348 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 LPAR4Q99677 370 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 APOL4Q9BPW4 351 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 UBQLN4Q9NRR5 601 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 FLRT3Q9NZU0 649 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 REV1Q9UBZ9 1251 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 SLC7A7Q9UM01 511 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 PCDHGA6Q9Y5G7 932 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 PCDHGA3Q9Y5H0 932 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 HSPE1-MOB4S4R3N1 261 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 SVILO95425 2214 aa6.89□□□□□ -1.31
TPM1-231ENST00000561395 DIDO1Q9BTC0 2240 aaKnown RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 A0A0B4J2E0 115 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TRBV11-1A0A0K0K1C0 115 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 A0A1B0GX12 115 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CDC14CA4D256 554 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ZAR1LA6NP61 321 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 SCDO00767 359 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ICOSLGO75144 302 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 REM1O75628 298 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 KLF7O75840 302 aaPredicted RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.311e-8■■□□□ 11.9
TPM1-231ENST00000561395 NTN1O95631 604 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CSTAP01040 98 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TP53P04637 393 aaPredicted RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 NGFRP08138 427 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CD63P08962 238 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 UBL4AP11441 157 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 OSMP13725 252 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 LIFP15018 202 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TBXA2RP21731 343 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CHMP24386 653 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ABCD3P28288 659 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ELK4P28324 431 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 GRNP28799 593 aaKnown RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 GSSP48637 474 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 PNLIPRP2P54317 469 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 SLC26A5P58743 744 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms