RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 VTCN1Q7Z7D3 282 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 RBM45Q8IUH3 476 aaKnown RBP9.3□□□□□ -0.92
LRRC28-221ENST00000561276 LACC1Q8IV20 430 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 ULK2Q8IYT8 1036 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 CADM2Q8N3J6 435 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 OR52E4Q8NGH9 312 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 OR4D11Q8NGI4 311 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 VANGL1Q8TAA9 524 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-221ENST00000561276 POC1BQ8TC44 478 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 ST8SIA1Q92185 356 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 ABTB1Q969K4 478 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-221ENST00000561276 CCDC124Q96CT7 223 aaKnown RBP9.3□□□□□ -0.92
LRRC28-221ENST00000561276 ASB9Q96DX5 294 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 MRGPRX4Q96LA9 322 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 NSMCE2Q96MF7 247 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 TIMP4Q99727 224 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 PIGQQ9BRB3 760 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 MUC13Q9H3R2 512 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 TNFRSF10DQ9UBN6 386 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 PRDM4Q9UKN5 801 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 ACAD8Q9UKU7 415 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 SHANK1Q9Y566 2161 aa9.3□□□□□ -0.92
LRRC28-221ENST00000561276 C7orf72A4D263 438 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 OR14I1A6ND48 311 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 NPIPA2E9PIF3 369 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 NPIPA3F8WFD2 350 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 H3BML4 177 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 LINC01387J3KSC0 135 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 AQP7O14520 342 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ACOT8O14734 319 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 PRKD3O94806 890 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 NTN1O95631 604 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 GCKP35557 465 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 APOBEC1P41238 236 aaKnown RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SLC1A3P43003 542 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 MERTKQ12866 999 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 FOXF1Q12946 379 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 NHSL2Q5HYW2 709 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 WBP2NLQ6ICG8 309 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 AAGABQ6PD74 315 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 POMZP3Q6PJE2 187 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 RANBP3LQ86VV4 465 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 CARM1Q86X55 608 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ADGRG3Q86Y34 549 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 CHERPQ8IWX8 916 aaKnown RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 EID3Q8N140 333 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 GTPBP8Q8N3Z3 284 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 FAM86B1Q8N7N1 296 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 LSMEM1Q8N8F7 131 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ST6GALNAC3Q8NDV1 305 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 MIB2Q96AX9 1013 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SARAFQ96BY9 339 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 RNF145Q96MT1 663 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SFXN2Q96NB2 322 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 MCHR1Q99705 422 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF559Q9BR84 538 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 UGT2B28Q9BY64 529 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ACER3Q9NUN7 267 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SPRR3Q9UBC9 169 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SLC7A8Q9UHI5 535 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 SAMD4AQ9UPU9 718 aaKnown RBP9.29□□□□□ -0.92
LRRC28-221ENST00000561276 POMPQ9Y244 141 aa9.29□□□□□ -0.92
LRRC28-221ENST00000561276 ETV2O00321 342 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-221ENST00000561276 STAMBPO95630 424 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 OPN1LWP04000 364 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 PEPDP12955 493 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ABOP16442 354 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF17P17021 662 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 CCNA2P20248 432 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 IL11P20809 199 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ATP6V1B2P21281 511 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 CXCR1P25024 350 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 HTR2AP28223 471 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 TACR3P29371 465 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 PTGS2P35354 604 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 HTR3AP46098 478 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 LHX2P50458 406 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 DLX5P56178 289 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 RBPJQ06330 500 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 CRYZQ08257 329 aaKnown RBP9.28□□□□□ -0.92
LRRC28-221ENST00000561276 OR1Q1Q15612 314 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 NPTX1Q15818 432 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ZSCAN26Q16670 478 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 GXYLT1Q4G148 440 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 IFI44LQ53G44 452 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ENTPD8Q5MY95 495 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 DCST1Q5T197 706 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 LCN8Q6JVE9 175 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ENPP6Q6UWR7 440 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 PLEKHM3Q6ZWE6 761 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 FGD2Q7Z6J4 655 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF605Q86T29 641 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 LILRA2Q8N149 483 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ATP6V1C2Q8NEY4 427 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 PYURFQ96I23 114 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms