RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ZNF629Q9UEG4 869 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC13A4Q9UKG4 626 aa8.13□□□□□ -1.11
SNRPA1-214ENST00000560987 KLF2Q9Y5W3 355 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-214ENST00000560987 PTPN13Q12923 2485 aa8.13□□□□□ -1.11
SNRPA1-214ENST00000560987 ICE1Q9Y2F5 2266 aa8.13□□□□□ -1.11
SNRPA1-214ENST00000560987 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 NAV2Q8IVL1 2488 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SPENQ96T58 3664 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ARHGAP21Q5T5U3 1957 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 A0A0J9YW62 118 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 C7orf72A4D263 438 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 CFAP73A6NFT4 308 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 GJE1A6NN92 205 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 EEF1E1-BLOC1S5C9J1V9 151 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 FBP2O00757 339 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 MRASO14807 208 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 EEF1E1O43324 174 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 EFNA2O43921 213 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 CXCL13O43927 109 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SERPINB7O75635 380 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 RCBTB2O95199 551 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 TGM6O95932 706 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 GKN3PP0CG01 181 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 NID1P14543 1247 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 UQCRBP14927 111 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 IL11P20809 199 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 UQCRC1P31930 480 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 CEACAM8P31997 349 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 OPRM1P35372 400 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 APOBEC1P41238 236 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 MTPNP58546 118 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 PON3Q15166 354 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC25A35Q3KQZ1 300 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 AP1ARQ63HQ0 302 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 GTF2IRD2BQ6EKJ0 949 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 OR2A2Q6IF42 318 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF550Q7Z398 422 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 GTF2IRD2Q86UP8 949 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 MSRB3Q8IXL7 192 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF440Q8IYI8 595 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 GCNT2Q8N0V5 402 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 DPP10Q8N608 796 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 METTL25Q8N6Q8 603 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 OR10A6Q8NH74 314 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 OR10D3Q8NH80 312 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 RP9Q8TA86 221 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 BBS10Q8TAM1 723 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC26A7Q8TE54 656 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ST8SIA1Q92185 356 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 FIG4Q92562 907 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 LRRC58Q96CX6 371 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 KLHL15Q96M94 604 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 OR5B2Q96R09 309 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF607Q96SK3 696 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 SH3GL1Q99961 368 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 PAQR5Q9NXK6 330 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 RPS6KB2Q9UBS0 482 aa8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 MCTS1Q9ULC4 181 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF443Q9Y2A4 671 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 USP9XQ93008 2570 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-214ENST00000560987 USP9YO00507 2555 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 A0A1W2PNR3 127 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MBD3L4A6NDZ8 208 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MBD3L3A6NE82 208 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MBD3L5A6NJ08 208 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 BBIP1A8MTZ0 92 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 AP3D1O14617 1153 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 AIM2O14862 343 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 NPPAP01160 153 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 PABPC4LP0CB38 370 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ARAFP10398 606 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 COX4I1P13073 169 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 DRD4P21917 467 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 CXCR1P25024 350 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 AQP1P29972 269 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 HTR3AP46098 478 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF136P52737 540 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 CTBP2P56545 445 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 SIRPAP78324 504 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 FOXF2Q12947 444 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MAPK11Q15759 364 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ZSWIM7Q19AV6 140 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 EEF1A1P5Q5VTE0 462 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 PRAMEF8Q5VWM4 474 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 PRAMEF7Q5VXH5 474 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 REP15Q6BDI9 236 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 NANOGP8Q6NSW7 305 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MEX3BQ6ZN04 569 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF836Q6ZNA1 936 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ESPNLQ6ZVH7 1005 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 PLEKHM3Q6ZWE6 761 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms