RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SZRD1Q7Z422 152 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 MTDHQ86UE4 582 aaKnown RBP16.27■□□□□ 0.2
TPM1-226ENST00000560959 TOR1AIP2Q8NFQ8 470 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 PPCDCQ96CD2 204 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 PLA2G12AQ9BZM1 189 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.2
TPM1-226ENST00000560959 MALT1Q9UDY8 824 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 DTNAQ9Y4J8 743 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 POC1B-GALNT4F8VUJ3 575 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 NPIPB9F8W1W9 429 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 M0R1B8 84 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 SPRY1O43609 319 aaPredicted RBP16.26■□□□□ 0.19
TPM1-226ENST00000560959 DNAJA2O60884 412 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 SEC22BO75396 215 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 PHC1P78364 1004 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 CBFBQ13951 182 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 MST1LQ2TV78 715 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 ZNF385BQ569K4 471 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 ABLIM2Q6H8Q1 611 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 ZNF572Q7Z3I7 529 aaPredicted RBP16.26■□□□□ 0.19
TPM1-226ENST00000560959 UBE2J2Q8N2K1 259 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 ZNF524Q96C55 264 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 CCDC126Q96EE4 140 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 OR5B2Q96R09 309 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 CCT7Q99832 543 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 SERINC1Q9NRX5 453 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 SH3BP4Q9P0V3 963 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 NOSIPQ9Y314 301 aaKnown RBP16.26■□□□□ 0.19
TPM1-226ENST00000560959 ATP23Q9Y6H3 246 aa16.26■□□□□ 0.19
TPM1-226ENST00000560959 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-226ENST00000560959 ESPNB1AK53 854 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 GPR171O14626 319 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 KIAA0513O60268 411 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 LY6HO94772 140 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 HMGN2P05204 90 aaKnown RBP16.25■□□□□ 0.19
TPM1-226ENST00000560959 ZNF23P17027 643 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 DIO1P49895 249 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 SLC7A5Q01650 507 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 QPRTQ15274 297 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 CR1LQ2VPA4 569 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-226ENST00000560959 ANKRD26P1Q6NSI1 321 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 C17orf78Q8N4C9 275 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 ST8SIA1Q92185 356 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 JADE3Q92613 823 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 CDS1Q92903 461 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 MTERF3Q96E29 417 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 FAM120BQ96EK7 910 aaKnown RBP16.25■□□□□ 0.19
TPM1-226ENST00000560959 FCRL1Q96LA6 429 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 FOXN4Q96NZ1 517 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 TRMOQ9BU70 441 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 C1orf109Q9NX04 203 aa16.25■□□□□ 0.19
TPM1-226ENST00000560959 IGHV4-61A0A0C4DH41 118 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 ZNF716A6NP11 495 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 SULT2B1O00204 365 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 ZNF264O43296 627 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 H6PDO95479 791 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 GSTA1P08263 222 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 DDX5P17844 614 aaKnown RBP16.24■□□□□ 0.19
TPM1-226ENST00000560959 CFPP27918 469 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 TIGD2Q4W5G0 525 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 CDC73Q6P1J9 531 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 C12orf54Q6X4T0 127 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 WDR31Q8NA23 367 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 C1orf162Q8NEQ5 155 aaPredicted RBP16.24■□□□□ 0.19
TPM1-226ENST00000560959 SLC25A43Q8WUT9 341 aaPredicted RBP16.24■□□□□ 0.19
TPM1-226ENST00000560959 ZFAND2BQ8WV99 257 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 ANKZF1Q9H8Y5 726 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 SIRT3Q9NTG7 399 aaPredicted RBP16.24■□□□□ 0.19
TPM1-226ENST00000560959 ZCCHC3Q9NUD5 404 aaKnown RBP16.24■□□□□ 0.19
TPM1-226ENST00000560959 DCTN4Q9UJW0 460 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 AMDHD2Q9Y303 409 aa16.24■□□□□ 0.19
TPM1-226ENST00000560959 A0A0A6YYJ9 748 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 SLCO1B7G3V0H7 640 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 PDLIM1O00151 329 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 SLC28A1O00337 649 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 DNPH1O43598 174 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 KRT16P08779 473 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 UROSP10746 265 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 FKBP2P26885 142 aaKnown RBP16.23■□□□□ 0.19
TPM1-226ENST00000560959 SLC16A1P53985 500 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 LASP1Q14847 261 aaKnown RBP16.23■□□□□ 0.19
TPM1-226ENST00000560959 IQCCQ4KMZ1 466 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 DCST2Q5T1A1 773 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 CNPY4Q8N129 248 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 TMEM234Q8WY98 164 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 ZHX1-C8orf76Q96EF9 292 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 OTUB1Q96FW1 271 aaPredicted RBP16.23■□□□□ 0.19
TPM1-226ENST00000560959 SORCS2Q96PQ0 1159 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 ACTRT3Q9BYD9 372 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 LAT2Q9GZY6 243 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 ADAM19Q9H013 955 aa16.23■□□□□ 0.19
TPM1-226ENST00000560959 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
TPM1-226ENST00000560959 A0A1W2PR80 420 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 MRPL33O75394 65 aaKnown RBP16.22■□□□□ 0.19
TPM1-226ENST00000560959 CRCPO75575 148 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 IGHV3-9P01782 118 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 ITGA5P08648 1049 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 UBL4AP11441 157 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms