RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SNX13Q9Y5W8 968 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 H3BML4 177 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 PYCARD-AS1I3L0S3 204 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 ARPC2O15144 300 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 STSP08842 583 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 GP1BBP13224 206 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 POU3F2P20265 443 aaPredicted RBP19.57■□□□□ 0.72
SNX1-206ENST00000559389 MSX2P35548 267 aaPredicted RBP19.57■□□□□ 0.72
SNX1-206ENST00000559389 STARP49675 285 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 CLDN18P56856 261 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 HOXC5Q00444 222 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 SELENBP1Q13228 472 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 C3AR1Q16581 482 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 EMC4Q5J8M3 183 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 LACC1Q8IV20 430 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 PROX1Q92786 737 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 WDYHV1Q96HA8 205 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 BTBD10Q9BSF8 475 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 ADPRHL2Q9NX46 363 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 ACAD8Q9UKU7 415 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 OSGIN2Q9Y236 505 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 AP4B1Q9Y6B7 739 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 ZNF462Q96JM2 2506 aa19.57■□□□□ 0.72
SNX1-206ENST00000559389 SMG1Q96Q15 3661 aaKnown RBP19.56■□□□□ 0.72
SNX1-206ENST00000559389 PRRG2O14669 202 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 SERPINA1P01009 418 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 CPN1P15169 458 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 IL11P20809 199 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 HTR2AP28223 471 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 CA7P43166 264 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 NCALDP61601 193 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 MERTKQ12866 999 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 NPTX1Q15818 432 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 BCL2A1Q16548 175 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 WBP2NLQ6ICG8 309 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 CBLL1Q75N03 491 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 RANBP3LQ86VV4 465 aaPredicted RBP19.56■□□□□ 0.72
SNX1-206ENST00000559389 PM20D2Q8IYS1 436 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 OR4D11Q8NGI4 311 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 OR6T1Q8NGN1 323 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 OR5M9Q8NGP3 310 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 THTPAQ9BU02 230 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 PCDHAC1Q9H158 963 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 MUC13Q9H3R2 512 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 GORASP2Q9H8Y8 452 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 TINAGQ9UJW2 476 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 SLC9A8Q9Y2E8 581 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 SVILO95425 2214 aa19.56■□□□□ 0.72
SNX1-206ENST00000559389 J3QKU1 62 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 EFNA2O43921 213 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 GMNNO75496 209 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 PEPDP12955 493 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 SLC1A3P43003 542 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 HTR3AP46098 478 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 RASSF2P50749 326 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 COPZ1P61923 177 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 RAC1P63000 192 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 SELENOWP63302 87 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 GXYLT1Q4G148 440 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 C3orf33Q6P1S2 294 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 GGNQ86UU5 652 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 DOLPP1Q86YN1 238 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 CADM2Q8N3J6 435 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 LSMEM1Q8N8F7 131 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 VANGL1Q8TAA9 524 aaPredicted RBP19.55■□□□□ 0.72
SNX1-206ENST00000559389 SMPDL3BQ92485 455 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 TPD52L3Q96J77 140 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 CLPTM1LQ96KA5 538 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 CTPS2Q9NRF8 586 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 RPS6KA6Q9UK32 745 aa19.55■□□□□ 0.72
SNX1-206ENST00000559389 DNAJC13O75165 2243 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 FIGNL2A6NMB9 653 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 EBAG9O00559 213 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 TPST2O60704 377 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 FMO6PO60774 539 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 DNAJC8O75937 253 aaPredicted RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 ZNF682O95780 498 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 TNFRSF1BP20333 461 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 ME2P23368 584 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 SHC1P29353 583 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 TACR3P29371 465 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 APOBEC1P41238 236 aaKnown RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 POLR2HP52434 150 aaKnown RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 CLDN20P56880 219 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 EIF2S3LQ2VIR3 472 aaKnown RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 CARM1Q86X55 608 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 EID3Q8N140 333 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 OR52E4Q8NGH9 312 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 LZICQ8WZA0 190 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 C3orf49Q96BT1 292 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 HSH2DQ96JZ2 352 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 ZNF559Q9BR84 538 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 ADAM19Q9H013 955 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 LRMDAQ9H2I8 198 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 TP63Q9H3D4 680 aaPredicted RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 TMEM185BQ9H7F4 350 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 DCAF13Q9NV06 445 aaKnown RBP19.54■□□□□ 0.72
SNX1-206ENST00000559389 ACTR3BQ9P1U1 418 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 OSGIN1Q9UJX0 560 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 CAMK2AQ9UQM7 478 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms