RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 SLC6A8P48029 635 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 RAC1P63000 192 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 CYLC2Q14093 348 aaPredicted RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 MAPRE2Q15555 327 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 CYP51A1Q16850 503 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 MMEL1Q495T6 779 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 GLIPR1L2Q4G1C9 344 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 LIN52Q52LA3 116 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 ZNF787Q6DD87 383 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 PLEKHM3Q6ZWE6 761 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 METTL25Q8N6Q8 603 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 OR10A6Q8NH74 314 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 OR10D3Q8NH80 312 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 FNDC9Q8TBE3 224 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 CA5BP1Q8WTZ4 195 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 DNAJA3Q96EY1 480 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 TMEM38AQ9H6F2 299 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 COQ10BQ9H8M1 238 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 ACER3Q9NUN7 267 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 BBIP1A8MTZ0 92 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 LINC01387J3KSC0 135 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 SLC22A2O15244 555 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 CXCL13O43927 109 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 TPST1O60507 370 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 CCDC22O60826 627 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 AQP8O94778 261 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 PGCP20142 388 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 KLK2P20151 261 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 TIMP3P35625 211 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 ACAA2P42765 397 aaKnown RBP16.8■□□□□ 0.28
CASC4-209ENST00000559222 EIF1AXP47813 144 aaKnown RBP16.8■□□□□ 0.28
CASC4-209ENST00000559222 IDH2P48735 452 aaKnown RBP16.8■□□□□ 0.28
CASC4-209ENST00000559222 HOXC5Q00444 222 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 TFF3Q07654 80 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 EPS8Q12929 822 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 PON3Q15166 354 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 COQ5Q5HYK3 327 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 RNF220Q5VTB9 566 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 PRAMEF8Q5VWM4 474 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 PRAMEF7Q5VXH5 474 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 REEP3Q6NUK4 255 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 GRAMD2AQ8IUY3 354 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 CMIPQ8IY22 773 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 LILRA2Q8N149 483 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 LILRB4Q8NHJ6 448 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 MRGPRX4Q96LA9 322 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 UCN2Q96RP3 112 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 WFDC6Q9BQY6 131 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 SRXN1Q9BYN0 137 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 NPDC1Q9NQX5 325 aaPredicted RBP16.8■□□□□ 0.28
CASC4-209ENST00000559222 CTPS2Q9NRF8 586 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 CORO2BQ9UQ03 480 aa16.8■□□□□ 0.28
CASC4-209ENST00000559222 NBPF19A0A087WUL8 3843 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 A0A1W2PNR3 127 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 TMEM247A6NEH6 219 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 OPN1SWP03999 348 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 THBS1P07996 1170 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 BMP5P22003 454 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 ELK4P28324 431 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 EIF1P41567 113 aaKnown RBP16.79■□□□□ 0.28
CASC4-209ENST00000559222 PCBP3P57721 371 aaKnown RBP16.79■□□□□ 0.28
CASC4-209ENST00000559222 MERTKQ12866 999 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 ZNF311Q5JNZ3 666 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 PIGWQ7Z7B1 504 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 SERPINA11Q86U17 422 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 CALHM3Q86XJ0 350 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 OR2V1Q8NHB1 315 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 ZNF563Q8TA94 476 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 ASB5Q8WWX0 329 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 ST8SIA1Q92185 356 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 PMM1Q92871 262 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 WNT2BQ93097 391 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 INTS12Q96CB8 462 aaKnown RBP16.79■□□□□ 0.28
CASC4-209ENST00000559222 KLHL15Q96M94 604 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 SPATA9Q9BWV2 254 aa16.79■□□□□ 0.28
CASC4-209ENST00000559222 SLC22A20A6NK97 555 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 AIM2O14862 343 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 IL2RAP01589 272 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
CASC4-209ENST00000559222 CCNA2P20248 432 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 SLC6A2P23975 617 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 ADH6P28332 368 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 DLX5P56178 289 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 DMTNQ08495 405 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 SELENBP1Q13228 472 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 GNA13Q14344 377 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 TMEM176BQ3YBM2 270 aaPredicted RBP16.78■□□□□ 0.28
CASC4-209ENST00000559222 HBMQ6B0K9 141 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 PPP4R4Q6NUP7 873 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 RP9Q8TA86 221 aaKnown RBP16.78■□□□□ 0.28
CASC4-209ENST00000559222 MRGBPQ9NV56 204 aa16.78■□□□□ 0.28
CASC4-209ENST00000559222 KLF2Q9Y5W3 355 aaPredicted RBP16.78■□□□□ 0.28
CASC4-209ENST00000559222 MPDZO75970 2070 aa16.77■□□□□ 0.28
CASC4-209ENST00000559222 CFAP73A6NFT4 308 aa16.77■□□□□ 0.28
CASC4-209ENST00000559222 CCT8L1PA6NM43 557 aa16.77■□□□□ 0.28
CASC4-209ENST00000559222 HSPB2A8KAH6 182 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms