RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 WLSQ5T9L3 541 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 PLEKHM3Q6ZWE6 761 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 C9orf106Q8NAJ2 232 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 SMYD1Q8NB12 490 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 CMTM5Q96DZ9 223 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 PIGQQ9BRB3 760 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 EFCAB1Q9HAE3 211 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 ACER3Q9NUN7 267 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 GID8Q9NWU2 228 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 TMEM181Q9P2C4 612 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 TAGLN3Q9UI15 199 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 CAMK2AQ9UQM7 478 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 ANGPT4Q9Y264 503 aa10.29□□□□□ -0.76
SNX1-204ENST00000559061 UTP20O75691 2785 aaKnown RBP10.28□□□□□ -0.76
SNX1-204ENST00000559061 CACNA1CQ13936 2221 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 A0A1B0GUH1 482 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 PRORSD1PA6NEY8 169 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 CLCA1A8K7I4 914 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 C5orf58C9J3I9 102 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 M0QX08 132 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ADAMDEC1O15204 470 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 LYPD3O95274 346 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 CLDN1O95832 211 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 TGM6O95932 706 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 PEPDP12955 493 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 POU3F2P20265 443 aaPredicted RBP10.28□□□□□ -0.76
SNX1-204ENST00000559061 FUT4P22083 530 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ELK4P28324 431 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 SLC6A8P48029 635 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 IDH2P48735 452 aaKnown RBP10.28□□□□□ -0.76
SNX1-204ENST00000559061 GNA13Q14344 377 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 FXNQ16595 210 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 NSUN5P2Q63ZY6 315 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 AAGABQ6PD74 315 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 RBM45Q8IUH3 476 aaKnown RBP10.28□□□□□ -0.76
SNX1-204ENST00000559061 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 UBQLNLQ8IYU4 475 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 MICU2Q8IYU8 434 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 TNIP2Q8NFZ5 429 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ZPLD1Q8TCW7 415 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ST8SIA1Q92185 356 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 SMPDL3BQ92485 455 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 FIG4Q92562 907 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 MRGPRX4Q96LA9 322 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 PSMG3-AS1Q96PY0 264 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 UCN2Q96RP3 112 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ARHGDIGQ99819 225 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 SRXN1Q9BYN0 137 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ADAM19Q9H013 955 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 CTPS2Q9NRF8 586 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 Q9UFV3 132 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 AP4B1Q9Y6B7 739 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 HCFC1P51610 2035 aa10.28□□□□□ -0.76
SNX1-204ENST00000559061 ICE1Q9Y2F5 2266 aa10.27□□□□□ -0.76
SNX1-204ENST00000559061 INTS1Q8N201 2190 aaKnown RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 ZC3H12DA2A288 527 aaKnown RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 MBD3L4A6NDZ8 208 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 MBD3L3A6NE82 208 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 CFAP73A6NFT4 308 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 MBD3L5A6NJ08 208 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 CD8B2A6NJW9 211 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 FIGNL2A6NMB9 653 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 AHRRA9YTQ3 701 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 H0Y3Z8 333 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 M0R3H8 397 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 NDUFAB1O14561 156 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 SEC14L5O43304 696 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 AGFG2O95081 481 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 NUDT14O95848 222 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 THY1P04216 161 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 TNFRSF1BP20333 461 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 ADH6P28332 368 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 CEACAM8P31997 349 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 KCNJ5P48544 419 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 RAC1P63000 192 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 PMPCAQ10713 525 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 VEZF1Q14119 521 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 LARS2Q15031 903 aaKnown RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 GUSBP1Q15486 140 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 NRF1Q16656 503 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 B3GNT6Q6ZMB0 384 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 RINLQ6ZS11 566 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 ARPINQ7Z6K5 226 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 CCDC71Q8IV32 467 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 FAM156AQ8NDB6 213 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 OR2T12Q8NG77 320 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 MBD3L2Q8NHZ7 208 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 SSC4DQ8WTU2 575 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 C3orf49Q96BT1 292 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 SH3GL1Q99961 368 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 HOPXQ9BPY8 73 aaPredicted RBP10.27□□□□□ -0.77
SNX1-204ENST00000559061 ECSITQ9BQ95 431 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 PINK1Q9BXM7 581 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 HHATLQ9HCP6 504 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 ALKBH4Q9NXW9 302 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms