RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C16orf58Q96GQ5 468 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 APOPT1Q96IL0 206 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PPP1R36Q96LQ0 422 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 MS4A4EQ96PG1 132 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 CCT7Q99832 543 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 FOXC2Q99958 501 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PIGQQ9BRB3 760 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 KLHL4Q9C0H6 718 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 TUBB1Q9H4B7 451 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 REEP4Q9H6H4 257 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 UBTD1Q9HAC8 227 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 C3orf14Q9HBI5 128 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ZCCHC3Q9NUD5 404 aaKnown RBP6.58□□□□□ -1.36
SPG11-213ENST00000558988 NDRG3Q9UGV2 375 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 ABCG2Q9UNQ0 655 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 CCL27Q9Y4X3 112 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 PCNX3Q9H6A9 2034 aa6.58□□□□□ -1.36
SPG11-213ENST00000558988 OTOGQ6ZRI0 2925 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 A0A1W2PPR1 153 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 A8MXE2 369 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 H3BQF6 201 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SCDO00767 359 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 CFLARO15519 480 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 HCRTR2O43614 444 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 AQP8O94778 261 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 OXSR1O95747 527 aaPredicted RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 HRGP04196 525 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 NEFHP12036 1026 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SFTPDP35247 375 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SOAT1P35610 550 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 HPCAL1P37235 193 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 CD79BP40259 229 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SLC6A8P48029 635 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 CTBP2P56545 445 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 EEFSECP57772 596 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 RPS3AP61247 264 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 NAA20P61599 178 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 PSPHP78330 225 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 C17orf67Q0P5P2 114 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 TP53BP2Q13625 1128 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 GANABQ14697 944 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 LASP1Q14847 261 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 DUSP5Q16690 384 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 DEFB113Q30KQ7 82 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 VPS26BQ4G0F5 336 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 ARL13AQ5H913 290 aaPredicted RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 KANK2Q63ZY3 851 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 OR2A2Q6IF42 318 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 Q6ZSR9 355 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SH2D5Q6ZV89 423 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 ADGRE4PQ86SQ3 457 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 ADGRG3Q86Y34 549 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 STPG3Q8N7X2 389 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 CDRT4Q8N9R6 151 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 WFDC11Q8NEX6 87 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 OR5AK3PQ8NH89 298 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 CEP70Q8NHQ1 597 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 RFWD2Q8NHY2 731 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPG11-213ENST00000558988 CDS1Q92903 461 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 STARD4Q96DR4 205 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 RNF145Q96MT1 663 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 DACH2Q96NX9 599 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 WFIKKN1Q96NZ8 548 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 NPAS1Q99742 590 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 KLHDC3Q9BQ90 382 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 SLC39A3Q9BRY0 314 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 LMF2Q9BU23 707 aaKnown RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 FBXO34Q9NWN3 711 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 TAS2R7Q9NYW3 318 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 JKAMPQ9P055 326 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPG11-213ENST00000558988 PROCRQ9UNN8 238 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 DNAJC15Q9Y5T4 150 aa6.57□□□□□ -1.36
SPG11-213ENST00000558988 V9GYY5 206 aaPredicted RBP6.57□□□□□ -1.36
SPG11-213ENST00000558988 DCHS2Q6V1P9 2916 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 A0A1W2PRB8 838 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 WDR91A4D1P6 747 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 TMEM114B3SHH9 223 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 TNFSF11O14788 317 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 LSM1O15116 133 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 EMC8O43402 210 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CXCL13O43927 109 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 KCNK2O95069 426 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PSMG1O95456 288 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 SYNGR4O95473 234 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 HMGN2P05204 90 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 LAMP1P11279 417 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 BCKDHAP12694 445 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 ATP6V1C1P21283 382 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 ME2P23368 584 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 ADSLP30566 484 aaPredicted RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 CCKARP32238 428 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 RPS19P39019 145 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 PRIM2P49643 509 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CCR4P51679 360 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CASP9P55211 416 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms