RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ZADH2Q8N4Q0 377 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ICA1LQ8NDH6 482 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 OR4C15Q8NGM1 316 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 DNAJA4Q8WW22 397 aaPredicted RBP16.43■□□□□ 0.22
CLPX-203ENST00000558958 C3orf49Q96BT1 292 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 JSRP1Q96MG2 331 aaPredicted RBP16.43■□□□□ 0.22
CLPX-203ENST00000558958 FUZQ9BT04 418 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ADAM19Q9H013 955 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ANKRD19PQ9H560 264 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 PTGES2Q9H7Z7 377 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ZFP64Q9NPA5 681 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 TAS2R10Q9NYW0 307 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 SLC7A7Q9UM01 511 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 PCDHGB6Q9Y5F9 930 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 PCNX3Q9H6A9 2034 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 ZZEF1O43149 2961 aa16.43■□□□□ 0.22
CLPX-203ENST00000558958 TRBV4-1A0A0J9YWV2 114 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ETV2O00321 342 aaPredicted RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 CDC40O60508 579 aaKnown RBP eCLIP16.42■□□□□ 0.229e-6■■■□□ 15.9
CLPX-203ENST00000558958 CBR3O75828 277 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 PDGFAP04085 211 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 FPR1P21462 350 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 DLX5P56178 289 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 FOXD4Q12950 439 aaPredicted RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 ALG10BQ5I7T1 473 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SWT1Q5T5J6 900 aaKnown RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 SHQ1Q6PI26 577 aaKnown RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 TMEM178AQ8NBL3 297 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SLC7A13Q8TCU3 470 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 C1GALT1C1Q96EU7 318 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 PRSS27Q9BQR3 290 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 RASSF4Q9H2L5 321 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 MED17Q9NVC6 651 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 OAZ3Q9UMX2 235 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 BOKQ9UMX3 212 aaPredicted RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 CACNA1GO43497 2377 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 TRAV17A0A0B4J275 112 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 KLRC4-KLRK1H3BQV0 150 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 CHP2O43745 196 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 GP1BBP13224 206 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ZNF23P17027 643 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ZNF41P51814 821 aaPredicted RBP16.42■□□□□ 0.22
CLPX-203ENST00000558958 TRIP10Q15642 601 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 EXOC3L2Q2M3D2 409 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 PLPPR5Q32ZL2 321 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 FGD3Q5JSP0 725 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 EPHX4Q8IUS5 362 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SVOPLQ8N434 492 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 OR5K1Q8NHB7 308 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 TMEM234Q8WY98 164 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SLC38A4Q969I6 547 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 NRBF2Q96F24 287 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ABHD17AQ96GS6 310 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 ALPK1Q96QP1 1244 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 SELENONQ9NZV5 590 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 STOML1Q9UBI4 398 aa16.42■□□□□ 0.22
CLPX-203ENST00000558958 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 K7EM74 188 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 PRKCAP17252 672 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 DSCR4P56555 118 aaPredicted RBP16.41■□□□□ 0.22
CLPX-203ENST00000558958 LAPTM4AQ15012 233 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 SLC25A53Q5H9E4 307 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 DCST1Q5T197 706 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 LPCAT4Q643R3 524 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 PODNL1Q6PEZ8 512 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 LINC00114Q6XXX2 140 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 WDR88Q6ZMY6 472 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 GRINAQ7Z429 371 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 ATG4DQ86TL0 474 aaPredicted RBP16.41■□□□□ 0.22
CLPX-203ENST00000558958 ZDHHC13Q8IUH4 622 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 NRG4Q8WWG1 115 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 MPP4Q96JB8 637 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 BARD1Q99728 777 aaKnown RBP16.41■□□□□ 0.22
CLPX-203ENST00000558958 CIB1Q99828 191 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 UBQLN3Q9H347 655 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 C12orf10Q9HB07 376 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 VDAC3Q9Y277 283 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 C15orf41Q9Y2V0 281 aa16.41■□□□□ 0.22
CLPX-203ENST00000558958 MAGED1Q9Y5V3 778 aaPredicted RBP16.41■□□□□ 0.22
CLPX-203ENST00000558958 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
CLPX-203ENST00000558958 A0A087WZY1 265 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 SH3PXD2BA1X283 911 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 G3V2T6 193 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 WISP1O95388 367 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 NTN1O95631 604 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 RFPL3SP0C7P2 107 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 DPP4P27487 766 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 PEX2P28328 305 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 TACR3P29371 465 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 HTR3AP46098 478 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 MEOX1P50221 254 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 ARHGDIAP52565 204 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 SEC23BQ15437 767 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 SNCBQ16143 134 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 MICAQ29983 383 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 OGFRL1Q5TC84 451 aaPredicted RBP16.4■□□□□ 0.22
CLPX-203ENST00000558958 HIPK1Q86Z02 1210 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms