RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NR2F1P10589 423 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 CD8BP10966 210 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 ETFAP13804 333 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 PGM1P36871 562 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 SLC18A1P54219 525 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 SUMO3P55854 103 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 HPCAP84074 193 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 KEAP1Q14145 624 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 FGFBP1Q14512 234 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF239Q16600 458 aaKnown RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 DPY19L1Q2PZI1 675 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 PDCD4Q53EL6 469 aaKnown RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 ZFP90Q8TF47 636 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 REXO5Q96IC2 774 aaKnown RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 GMPPAQ96IJ6 420 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 MRGPRX4Q96LA9 322 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 EBF4Q9BQW3 602 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 PLEKHF2Q9H8W4 249 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 HHATLQ9HCP6 504 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 CTPS2Q9NRF8 586 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 AGR2O95994 175 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 IDO1P14902 403 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 CD1EP15812 388 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 PGCP20142 388 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 AGTR1P30556 359 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 CRATP43155 626 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 IDH2P48735 452 aaKnown RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 KCNJ10P78508 379 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 PLAURQ03405 335 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 SELENBP1Q13228 472 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 RPS26P11Q5JNZ5 115 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 TMEM201Q5SNT2 666 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 C6orf10Q5SRN2 563 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 SLC2A7Q6PXP3 512 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 EPGNQ6UW88 154 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 PLEKHM3Q6ZWE6 761 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 WFDC8Q8IUA0 241 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 TRIML2Q8N7C3 387 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 OR6K3Q8NGY3 331 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 DYDC1Q8WWB3 177 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 MAELQ96JY0 434 aaKnown RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 OR11A1Q9GZK7 315 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 SLC38A1Q9H2H9 487 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 TIGARQ9NQ88 270 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 ACER3Q9NUN7 267 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 PAQR5Q9NXK6 330 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 ELOVL5Q9NYP7 299 aa11.16□□□□□ -0.62
SMAD3-208ENST00000558827 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-208ENST00000558827 GJE1A6NN92 205 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 DEFB108AA8MXU0 73 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 KRT75O95678 551 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 IL6P05231 212 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 THBDP07204 575 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 NUDT7P0C024 238 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 GKN3PP0CG01 181 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 EDNRAP25101 427 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ELK4P28324 431 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ADH6P28332 368 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 IDH3AP50213 366 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 MAPK11Q15759 364 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 SLC25A53Q5H9E4 307 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 GTF2IRD2BQ6EKJ0 949 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 GTF2IRD2Q86UP8 949 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 CXorf67Q86X51 503 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-208ENST00000558827 VRK2Q86Y07 508 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 MIER2Q8N344 545 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ARFGAP2Q8N6H7 521 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 RNF128Q8TEB7 428 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF300Q96RE9 604 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-208ENST00000558827 SAP130Q9H0E3 1048 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 RLIMQ9NVW2 624 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ZIM2Q9NZV7 527 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 ARID1AO14497 2285 aa11.15□□□□□ -0.62
SMAD3-208ENST00000558827 NR5A2O00482 541 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 KLF11O14901 512 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
SMAD3-208ENST00000558827 PRKD3O94806 890 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ATE1O95260 518 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 PLAUP00749 431 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 RAF1P04049 648 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 FESP07332 822 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 CRYGSP22914 178 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 AQP5P55064 265 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 OR2B6P58173 313 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 RASGEF1BQ0VAM2 473 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 SF3A3Q12874 501 aaKnown RBP eCLIP11.14□□□□□ -0.631e-10■■■■■ 34.8
SMAD3-208ENST00000558827 GSTA3Q16772 222 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms