RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	RNF165	Q6ZSG1	346 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	LSR	Q86X29	649 aa	Predicted RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	WDR75	Q8IWA0	830 aa	Known RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	ZNF781	Q8N8C0	355 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	OR7A2P	Q8NGA2	310 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	POC1B	Q8TC44	478 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	FAM110B	Q8TC76	370 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	RNF141	Q8WVD5	230 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	JADE3	Q92613	823 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	HOXB13	Q92826	284 aa	Predicted RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	CDS1	Q92903	461 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	ZNF524	Q96C55	264 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	FCRL1	Q96LA6	429 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	C3orf30	Q96M34	536 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	RNF145	Q96MT1	663 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	SORT1	Q99523	831 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	MED18	Q9BUE0	208 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	C1orf50	Q9BV19	199 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	PRRG4	Q9BZD6	226 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	UBTD1	Q9HAC8	227 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	C3orf14	Q9HBI5	128 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	SIRT3	Q9NTG7	399 aa	Predicted RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	GIN1	Q9NXP7	522 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	MRTO4	Q9UKD2	239 aa	Known RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	PROCR	Q9UNN8	238 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	EIF3L	Q9Y262	564 aa	Known RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	WBP11	Q9Y2W2	641 aa	Known RBP	6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	AP4B1	Q9Y6B7	739 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	KCNE3	Q9Y6H6	103 aa		6.26	□□□□□ -1.41
MARK3-215	ENST00000558787	CSPG4	Q6UVK1	2322 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787		A0A0J9YW62	118 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787		A0A1W2PRB8	838 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ALG1L2	C9J202	215 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	C16orf97	H3BN30	126 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	TNFSF11	O14788	317 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	HDAC3	O15379	428 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	EFNA2	O43921	213 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PF4	P02776	101 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	THBD	P07204	575 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ALOX5	P09917	674 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	TBXA2R	P21731	343 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PSMA4	P25789	261 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	FRK	P42685	505 aa	Predicted RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PRIM2	P49643	509 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PSMD4	P55036	377 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	RPS3A	P61247	264 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	EEF1A1	P68104	462 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PDE7A	Q13946	482 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	GANAB	Q14697	944 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	LASP1	Q14847	261 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	PTGR1	Q14914	329 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	GUSBP1	Q15486	140 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	TSC22D1	Q15714	1073 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CTU2	Q2VPK5	515 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	NDUFAF6	Q330K2	333 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	GLYR1	Q49A26	553 aa	Predicted RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CPTP	Q5TA50	214 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	EEF1A1P5	Q5VTE0	462 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	OLIG3	Q7RTU3	272 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CPLX4	Q7Z7G2	160 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	LRRC34	Q8IZ02	419 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CLEC4F	Q8N1N0	589 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CIART	Q8N365	385 aa	Predicted RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	KRTCAP2	Q8N6L1	136 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	METTL25	Q8N6Q8	603 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	COX18	Q8N8Q8	333 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CDRT4	Q8N9R6	151 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ATP6V1C2	Q8NEY4	427 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	OR10D3	Q8NH80	312 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CEP70	Q8NHQ1	597 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ZFP28	Q8NHY6	868 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	TWIST2	Q8WVJ9	160 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	STON2	Q8WXE9	905 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ROBO4	Q8WZ75	1007 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ARSG	Q96EG1	525 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	FAM120B	Q96EK7	910 aa	Known RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	DTNBP1	Q96EV8	351 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ZBED6CL	Q96FA7	236 aa	Predicted RBP	6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	MARK4	Q96L34	752 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	MS4A4E	Q96PG1	132 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	SLC39A3	Q9BRY0	314 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	C20orf27	Q9GZN8	174 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	CXorf36	Q9H7Y0	433 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	SLCO1B3	Q9NPD5	702 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	MED17	Q9NVC6	651 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	FGFR1OP2	Q9NVK5	253 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ELOVL5	Q9NYP7	299 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	NTM	Q9P121	344 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ZDHHC2	Q9UIJ5	367 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ZNF175	Q9Y473	711 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	SNX8	Q9Y5X2	465 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	ABCA2	Q9BZC7	2435 aa		6.25	□□□□□ -1.41
MARK3-215	ENST00000558787	FN1	P02751	2386 aa	Known RBP	6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	USF3	Q68DE3	2245 aa		6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	TTC36	A6NLP5	189 aa		6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	SCD	O00767	359 aa		6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	TBX19	O60806	448 aa		6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	SKAP2	O75563	359 aa	Predicted RBP	6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	C6orf47	O95873	294 aa		6.24	□□□□□ -1.41
MARK3-215	ENST00000558787	FAM107A	O95990	144 aa		6.24	□□□□□ -1.41

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