RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 EIF3MQ7L2H7 374 aaKnown RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 GTF2IRD2Q86UP8 949 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 STK32CQ86UX6 486 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 ZNF610Q8N9Z0 462 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 STON2Q8WXE9 905 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 SH3YL1Q96HL8 342 aaPredicted RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 TRNT1Q96Q11 434 aaKnown RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 CCDC28BQ9BUN5 200 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 LAT2Q9GZY6 243 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 SERHL2Q9H4I8 314 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 MTHFD2LQ9H903 347 aaPredicted RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 THUMPD1Q9NXG2 353 aaKnown RBP13.66□□□□□ -0.22
RPL28-206ENST00000558752 WDR45Q9Y484 360 aa13.66□□□□□ -0.22
RPL28-206ENST00000558752 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 FAM234BA2RU67 622 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 FCMRO60667 390 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 DNAJA2O60884 412 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 PSMA4P25789 261 aaKnown RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 ELK4P28324 431 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 CLDN20P56880 219 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 STX1BP61266 288 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 RPS26P62854 115 aaKnown RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 ZNF117Q03924 483 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 CBFBQ13951 182 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 EXOC3L2Q2M3D2 409 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPL28-206ENST00000558752 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 MAVSQ7Z434 540 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 CLEC4FQ8N1N0 589 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 OR5M1Q8NGP8 315 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 OR6K3Q8NGY3 331 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 FNDC9Q8TBE3 224 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 ITCHQ96J02 903 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 MRGPRX4Q96LA9 322 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 OR52B2Q96RD2 323 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 TCF7L2Q9NQB0 619 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 GLRX2Q9NS18 164 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 MCTS1Q9ULC4 181 aaKnown RBP13.65□□□□□ -0.22
RPL28-206ENST00000558752 SLC35A3Q9Y2D2 325 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 CARD8Q9Y2G2 431 aa13.65□□□□□ -0.22
RPL28-206ENST00000558752 TLN2Q9Y4G6 2542 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 GMFGO60234 142 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 UGT2B17O75795 530 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 NUDT14O95848 222 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 PABPC4LP0CB38 370 aaKnown RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 UBL4AP11441 157 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 CCKARP32238 428 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 IDH3AP50213 366 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ATP5J2P56134 94 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 HPCAP84074 193 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 GNA13Q14344 377 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ETFDHQ16134 617 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 SLC25A53Q5H9E4 307 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 PDZK1Q5T2W1 519 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 TNFAIP8L2Q6P589 184 aaPredicted RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 CBLN3Q6UW01 205 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 GGNQ86UU5 652 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 RNF130Q86XS8 419 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ZNF614Q8N883 585 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 CKAP2Q8WWK9 683 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 TMEM234Q8WY98 164 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 MARK4Q96L34 752 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 OR10A4Q9H209 315 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 PLSCR4Q9NRQ2 329 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.64□□□□□ -0.23
RPL28-206ENST00000558752 MKLN1Q9UL63 735 aa13.64□□□□□ -0.23
RPL28-206ENST00000558752 NPIPA5A0A0B4J1W7 369 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
RPL28-206ENST00000558752 NPIPA7E9PJI5 369 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 HMGN4O00479 90 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 EIF1AYO14602 144 aaKnown RBP13.63□□□□□ -0.23
RPL28-206ENST00000558752 KIAA0513O60268 411 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 SYNGR4O95473 234 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 ANP32DO95626 131 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 CSTAP01040 98 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 NPIPA8P0DM63 369 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 PGCP20142 388 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 IL11P20809 199 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 CARD18P57730 90 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 ZSWIM7Q19AV6 140 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 GPAT3Q53EU6 434 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 ANKRD34AQ69YU3 496 aa13.63□□□□□ -0.23
RPL28-206ENST00000558752 TYW3Q6IPR3 259 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms