RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 C7orf57Q8NEG2 295 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 OR10G2Q8NGC3 310 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 RHOXF1Q8NHV9 184 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 ITFG2Q969R8 447 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 SLC35A5Q9BS91 424 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 COPS4Q9BT78 406 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 CXorf36Q9H7Y0 433 aa9.45□□□□□ -0.9
TPM1-212ENST00000558347 SIRT3Q9NTG7 399 aaPredicted RBP9.45□□□□□ -0.9
TPM1-212ENST00000558347 DIDO1Q9BTC0 2240 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 TEX15Q9BXT5 2789 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 CLCA1A8K7I4 914 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 C17orf105B2RV13 164 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 MPZL2O60487 215 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ZFAND5O76080 213 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 C1QCP02747 245 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 NUDT7P0C024 238 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ARAFP10398 606 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 CPMP14384 443 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 CD36P16671 472 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 CD40LGP29965 261 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 FEN1P39748 380 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 CRATP43155 626 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 XKP51811 444 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 NCBP2P52298 156 aaKnown RBP eCLIP9.44□□□□□ -0.9
TPM1-212ENST00000558347 PCBP3P57721 371 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 ALDH6A1Q02252 535 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 DUSP2Q05923 314 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 BIKQ13323 160 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SERTAD2Q14140 314 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SAXO2Q658L1 398 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 DGAT2L6Q6ZPD8 337 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 MDGA2Q7Z553 956 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 TSEN54Q7Z6J9 526 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 GALNT10Q86SR1 603 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ARMC8Q8IUR7 673 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 LACC1Q8IV20 430 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 LRRC25Q8N386 305 aaPredicted RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 ZBTB8BQ8NAP8 495 aaPredicted RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 MORN4Q8NDC4 146 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 OR14A16Q8NHC5 309 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 NDNFQ8TB73 568 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SPPL2AQ8TCT8 520 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SLC2A12Q8TD20 617 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SFXN5Q8TD22 340 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 DAZLQ92904 295 aaKnown RBP9.44□□□□□ -0.9
TPM1-212ENST00000558347 RELTQ969Z4 430 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 MOAP1Q96BY2 351 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 LGALS12Q96DT0 336 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 GPR137Q96N19 417 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 COL21A1Q96P44 957 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 OR8D2Q9GZM6 311 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 MMP27Q9H306 513 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ZNF556Q9HAH1 456 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 DAPK2Q9UIK4 370 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 SH3BGRL2Q9UJC5 107 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 ANGPT4Q9Y264 503 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 CLCA3PQ9Y6N3 262 aa9.44□□□□□ -0.9
TPM1-212ENST00000558347 TRGV8A0A0C4DH27 118 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 ISPDA4D126 451 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SH3D21A4FU49 640 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SYNDIG1LA6NDD5 238 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 EFCAB9A8MZ26 197 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 NPIPA5E9PKD4 350 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 OR2J2O76002 312 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 ATP1B1P05026 303 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SLC35E2P0CK97 266 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 TNNI3P19429 210 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 EPHA2P29317 976 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 LIMS1P48059 325 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 PRIM2P49643 509 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SSR4P51571 173 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 PER3P56645 1201 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 RPS3AP61247 264 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 VBP1P61758 197 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 CDK6Q00534 326 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SPIBQ01892 262 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 HSPB3Q12988 150 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 IRF3Q14653 427 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SMN1Q16637 294 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 FAM180BQ6P0A1 224 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 USP43Q70EL4 1123 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 AHSA2Q719I0 299 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SULF2Q8IWU5 870 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 CYP4Z2PQ8N1L4 340 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 TMEM156Q8N614 296 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 FAM98AQ8NCA5 519 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 ZNF675Q8TD23 568 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 TAMM41Q96BW9 452 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 ZHX1-C8orf76Q96EF9 292 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 NEURL3Q96EH8 262 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 FEVQ99581 238 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 PIP5K1AQ99755 562 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 BTBD2Q9BX70 525 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 SLIRPQ9GZT3 109 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 NXF2Q9GZY0 626 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 GPATCH2Q9NW75 528 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms