RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GARNL3Q5VVW2 1013 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 FAAH2Q6GMR7 532 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 NIPAL1Q6NVV3 410 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SLC35F3Q8IY50 421 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SLC37A3Q8NCC5 494 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 TP53INP1Q96A56 240 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 SENP5Q96HI0 755 aaPredicted RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 MRPS18AQ9NVS2 196 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 MRPS17Q9Y2R5 130 aaKnown RBP9.72□□□□□ -0.85
TPM1-210ENST00000558264 PCDHGB6Q9Y5F9 930 aa9.72□□□□□ -0.85
TPM1-210ENST00000558264 C4orf47A7E2U8 309 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 DLGAP3O95886 979 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 CLPSP04118 112 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 FOLR1P15328 257 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 CSF2RBP32927 897 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 RORCP51449 518 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 SKP1P63208 163 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 CD226Q15762 336 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 RNLSQ5VYX0 342 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 ZNF613Q6PF04 617 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 MED25Q71SY5 747 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 SLC25A45Q8N413 288 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 RFLNBQ8N5W9 214 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 ZNF615Q8N8J6 731 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 SDR9C7Q8NEX9 313 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 TOR1AIP2Q8NFQ8 470 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 OR1L3Q8NH93 324 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 C1orf216Q8TAB5 229 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 ZDHHC12Q96GR4 267 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 MESP1Q9BRJ9 268 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 ZNF649Q9BS31 505 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 RPS6KB2Q9UBS0 482 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.85
TPM1-210ENST00000558264 ADAM18Q9Y3Q7 739 aa9.71□□□□□ -0.85
TPM1-210ENST00000558264 PRR23D1E9PI22 279 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 LOC110117498-PIK3R3F6TDL0 507 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 SNX4O95219 450 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 PRR23D2P0DMB1 279 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.71□□□□□ -0.86
TPM1-210ENST00000558264 DSG2Q14126 1118 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 FGFBP1Q14512 234 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 GRM7Q14831 915 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 PRPF38BQ5VTL8 546 aaKnown RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 CBLN3Q6UW01 205 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 TMPRSS11FQ6ZWK6 438 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 RNF113BQ8IZP6 322 aaKnown RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 OR8H2Q8N162 312 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 KLHL36Q8N4N3 616 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 CADM4Q8NFZ8 388 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 OR4K13Q8NH42 304 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 PTPMT1Q8WUK0 201 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 ASB15Q8WXK1 588 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 HOXB13Q92826 284 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 ZNF524Q96C55 264 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 SDHCQ99643 169 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 SLC30A2Q9BRI3 323 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 NXF5Q9H1B4 397 aaKnown RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 CCDC86Q9H6F5 360 aaKnown RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 MCCC2Q9HCC0 563 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 LANCL2Q9NS86 450 aa9.71□□□□□ -0.86
TPM1-210ENST00000558264 SIRT4Q9Y6E7 314 aaPredicted RBP9.71□□□□□ -0.86
TPM1-210ENST00000558264 IGHV1OR21-1A0A087WYE8 117 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 SHISA3A0PJX4 238 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 TAF4O00268 1085 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 SLC30A4O14863 429 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 FMO6PO60774 539 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 RCBTB2O95199 551 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ATP12AP54707 1039 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 IGLV3-21P80748 117 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZP2Q05996 745 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 RUNX1T1Q06455 604 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 FUT7Q11130 342 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 PLK5Q496M5 336 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZNF362Q5T0B9 420 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 POMZP3Q6PJE2 187 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 APOOLQ6UXV4 268 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 RPTNQ6XPR3 784 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MEPCEQ7L2J0 689 aaKnown RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 C17orf82Q86X59 251 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 CADM3Q8N126 398 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 LNX2Q8N448 690 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 OR52E2Q8NGJ4 325 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 OR4C6Q8NH72 309 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 PHOSPHO1Q8TCT1 267 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 KISS1RQ969F8 398 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZNF285Q96NJ3 590 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ERMAPQ96PL5 475 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 NUDT22Q9BRQ3 303 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ALG8Q9BVK2 526 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ABCB9Q9NP78 766 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 POLE3Q9NRF9 147 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms