RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KCNK2O95069 426 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 PSMG1O95456 288 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 WNT11O96014 354 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ALOX5P09917 674 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 CHN1P15882 459 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 DDX5P17844 614 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 TCP1P17987 556 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 GIFP27352 417 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 HMOX2P30519 316 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 TIA1P31483 386 aaKnown RBP eCLIP4.53□□□□□ -1.68
SPG11-208ENST00000558155 GPC1P35052 558 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 HSD17B3P37058 310 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 MAP3K8P41279 467 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 PRIM2P49643 509 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 IDH3GP51553 393 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 P2RX1P51575 399 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 PRKAG1P54619 331 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 CDH15P55291 814 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 PRPS1P60891 318 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 CSNK2A1P68400 391 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 CLCQ05315 142 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 FOXF1Q12946 379 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SELENBP1Q13228 472 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 RASA2Q15283 850 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 TRADDQ15628 312 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZSWIM7Q19AV6 140 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 TECRLQ5HYJ1 363 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SPDYAQ5MJ70 313 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 LETMD1Q6P1Q0 360 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 GALNT18Q6P9A2 607 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZCCHC12Q6PEW1 402 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SHQ1Q6PI26 577 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 LRIG3Q6UXM1 1119 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 TMPPEQ6ZT21 453 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 USP43Q70EL4 1123 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 IKBIPQ70UQ0 350 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 MTDHQ86UE4 582 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 GLCCI1Q86VQ1 547 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 LRRC8AQ8IWT6 810 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SLC35F6Q8N357 371 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 C17orf78Q8N4C9 275 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 WDR31Q8NA23 367 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZNF527Q8NB42 609 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 NUP43Q8NFH3 380 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SEMA6DQ8NFY4 1073 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 METTL6Q8TCB7 284 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 GPR119Q8TDV5 335 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 FBF1Q8TES7 1133 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 UBASH3BQ8TF42 649 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZNF75CPQ92670 426 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 HOXB13Q92826 284 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 MRRFQ96E11 262 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZHX1-C8orf76Q96EF9 292 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 APIPQ96GX9 242 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 AMDHD1Q96NU7 426 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 OR5B2Q96R09 309 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZNF300Q96RE9 604 aaPredicted RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 KCNS3Q9BQ31 491 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SOX7Q9BT81 388 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ZNF747Q9BV97 191 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 EBPLQ9BY08 206 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SAP130Q9H0E3 1048 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 EQTNQ9NQ60 294 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SERINC1Q9NRX5 453 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 PARPBPQ9NWS1 579 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SIRT5Q9NXA8 310 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 UPB1Q9UBR1 384 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 MOKQ9UQ07 419 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 AMDHD2Q9Y303 409 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 GRIP1Q9Y3R0 1128 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 ACTL7BQ9Y614 415 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 IGKV3D-15A0A087WSY6 115 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ATP6V1G2-DDX39BF2Z307 99 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 TMPRSS2O15393 492 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PDE5AO76074 875 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 BCL10O95999 233 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 IGHV3-9P01782 118 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 RPS17P08708 135 aaKnown RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 DAOP14920 347 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 IFNGR1P15260 489 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PRKCAP17252 672 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 TSPAN8P19075 237 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ATP6V1C1P21283 382 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 EDNRAP25101 427 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 FKBP2P26885 142 aaKnown RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 PAFAH1B1P43034 410 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 MAGEA4P43358 317 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 MAGEA8P43361 318 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PPOXP50336 477 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 SERPINB8P50452 374 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 RNF144AP50876 292 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 HILS1P60008 231 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 POU6F2P78424 691 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF117Q03924 483 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF763Q0D2J5 394 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 FOXL1Q12952 345 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 HSPB3Q12988 150 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms