RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 OR2V1Q8NHB1 315 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 LILRB4Q8NHJ6 448 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 MBD3L2Q8NHZ7 208 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 POC1BQ8TC44 478 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ST8SIA1Q92185 356 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 CNOT9Q92600 299 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 ZG16BQ96DA0 208 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ZNF845Q96IR2 970 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 ANKRD27Q96NW4 1050 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 NPAS1Q99742 590 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 KLHDC3Q9BQ90 382 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ECSITQ9BQ95 431 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 CPPED1Q9BRF8 314 aaPredicted RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 TRIM8Q9BZR9 551 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 KLHL28Q9NXS3 571 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
SPG11-207ENST00000558138 SELENONQ9NZV5 590 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 ARHGAP21Q5T5U3 1957 aa8.09□□□□□ -1.11
SPG11-207ENST00000558138 FLNCQ14315 2725 aa8.09□□□□□ -1.12
SPG11-207ENST00000558138 MED12Q93074 2177 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 PRORSD1PA6NEY8 169 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 AIM2O14862 343 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SLC22A2O15244 555 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 PGM3O95394 542 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 TGM6O95932 706 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 THBS1P07996 1170 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 GKN3PP0CG01 181 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ARAFP10398 606 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 IL11P20809 199 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 APOBEC1P41238 236 aaKnown RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 HTR3AP46098 478 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 KCNJ5P48544 419 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ASCL1P50553 236 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZNF136P52737 540 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SESN3P58005 492 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 CDSNQ15517 529 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZSWIM7Q19AV6 140 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 PRAMEF8Q5VWM4 474 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 PRAMEF7Q5VXH5 474 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 DLEU7Q6UYE1 221 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 MEX3BQ6ZN04 569 aaKnown RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 SEM1Q6ZVN7 128 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 PLEKHM3Q6ZWE6 761 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 GRINAQ7Z429 371 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 LUZP2Q86TE4 346 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ARMC8Q8IUR7 673 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 NAXEQ8NCW5 288 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 RP9Q8TA86 221 aaKnown RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 FNDC9Q8TBE3 224 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 FIG4Q92562 907 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 OSTF1Q92882 214 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 CPNE4Q96A23 557 aaPredicted RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 LRRC58Q96CX6 371 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 DDIT4LQ96D03 193 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 RCN3Q96D15 328 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZHX1-C8orf76Q96EF9 292 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 DNAJA3Q96EY1 480 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZFP3Q96NJ6 502 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SLC39A3Q9BRY0 314 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SPATA9Q9BWV2 254 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 IKZF5Q9H5V7 419 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 SLC52A3Q9NQ40 469 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 EXOSC3Q9NQT5 275 aaKnown RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 CTPS2Q9NRF8 586 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ACER3Q9NUN7 267 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 RLIMQ9NVW2 624 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 CLCF1Q9UBD9 225 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZNF629Q9UEG4 869 aaPredicted RBP8.08□□□□□ -1.12
SPG11-207ENST00000558138 EMC9Q9Y3B6 208 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ZNF175Q9Y473 711 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 ICE1Q9Y2F5 2266 aa8.08□□□□□ -1.12
SPG11-207ENST00000558138 LRRK2Q5S007 2527 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 NCOA6Q14686 2063 aaPredicted RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 PCNX3Q9H6A9 2034 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 TRBV5-3A0A0A0MS03 114 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 A0A0J9YW62 118 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 A0A1W2PNR3 127 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 CDHR4A6H8M9 788 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 FBP2O00757 339 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 AP3D1O14617 1153 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 HNRNPRO43390 633 aaKnown RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 BCAS1O75363 584 aaPredicted RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 TOXO94900 526 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 RCBTB2O95199 551 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 OPN1SWP03999 348 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 COX4I1P13073 169 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 ETS2P15036 469 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 HOXB9P17482 250 aaPredicted RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 GPX2P18283 190 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 DRD4P21917 467 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 RPS4Y1P22090 263 aaKnown RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 CXCR1P25024 350 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
SPG11-207ENST00000558138 NUDT2P50583 147 aa8.07□□□□□ -1.12
SPG11-207ENST00000558138 POLR2HP52434 150 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms