RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 DSN1Q9H410 356 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 GALNT9Q9HCQ5 603 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 PLA2G3Q9NZ20 509 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 DKKL1Q9UK85 242 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 A4GNTQ9UNA3 340 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 TMEM5Q9Y2B1 443 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 ORC6Q9Y5N6 252 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 CSAG2Q9Y5P2 127 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
TPM1-209ENST00000558072 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 A0A1B0GX12 115 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 C7orf72A4D263 438 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 GJE1A6NN92 205 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 ETV2O00321 342 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 CCNB2O95067 398 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 ZNF17P17021 662 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 CDH2P19022 906 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 ELK4P28324 431 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 CLK1P49759 484 aaKnown RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 PLGLB1Q02325 96 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 QPRTQ15274 297 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 TRIP10Q15642 601 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 MICAQ29983 383 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 HYAL4Q2M3T9 481 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 RFX4Q33E94 735 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 SLC25A53Q5H9E4 307 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 RPUSD3Q6P087 351 aaKnown RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 TTC33Q6PID6 262 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 CBLN3Q6UW01 205 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 MDGA2Q7Z553 956 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 SLC25A43Q8WUT9 341 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 C1GALT1C1Q96EU7 318 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 RBM4BQ9BQ04 359 aaKnown RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 PIGQQ9BRB3 760 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 RBM4Q9BWF3 364 aaKnown RBP11.29□□□□□ -0.6
TPM1-209ENST00000558072 NDEL1Q9GZM8 345 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 ADAM19Q9H013 955 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 MED11Q9P086 117 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 LYVE1Q9Y5Y7 322 aa11.29□□□□□ -0.6
TPM1-209ENST00000558072 A0A087WUJ7 227 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 C17orf51A8MQB3 221 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 GNB5O14775 395 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 FRS3O43559 492 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
TPM1-209ENST00000558072 MT-ND1P03886 318 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 DPP4P27487 766 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 YAP1P46937 504 aaKnown RBP11.28□□□□□ -0.6
TPM1-209ENST00000558072 CD97P48960 835 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 SESN3P58005 492 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 COX10Q12887 443 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 ZNF169Q14929 603 aaPredicted RBP11.28□□□□□ -0.6
TPM1-209ENST00000558072 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 ZBTB49Q6ZSB9 765 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 GDF7Q7Z4P5 450 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 AMIGO2Q86SJ2 522 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 RBM45Q8IUH3 476 aaKnown RBP11.28□□□□□ -0.6
TPM1-209ENST00000558072 LACC1Q8IV20 430 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 SULF2Q8IWU5 870 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 WDSUB1Q8N9V3 476 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 ZFP62Q8NB50 900 aaPredicted RBP11.28□□□□□ -0.6
TPM1-209ENST00000558072 ICA1LQ8NDH6 482 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 PIGXQ8TBF5 258 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 STK35Q8TDR2 534 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 RDH12Q96NR8 316 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 SIGLEC12Q96PQ1 595 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 TMEM43Q9BTV4 400 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 MED17Q9NVC6 651 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 KIF17Q9P2E2 1029 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 SLC7A7Q9UM01 511 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 C15orf41Q9Y2V0 281 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 MED31Q9Y3C7 131 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 CHD8Q9HCK8 2581 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 DMXL2Q8TDJ6 3036 aa11.28□□□□□ -0.6
TPM1-209ENST00000558072 G3V3Y1 287 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 H0YJX3 145 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 FFAR1O14842 300 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 ZNF208O43345 1280 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 OR2T1O43869 369 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 HPRP00739 348 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 CRYABP02511 175 aaKnown RBP11.27□□□□□ -0.61
TPM1-209ENST00000558072 FAM87AP0C7U9 286 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 PRG2P13727 222 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 PRKCAP17252 672 aa11.27□□□□□ -0.61
TPM1-209ENST00000558072 HK1P19367 917 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms