RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 DHHO43323 396 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 KLK1P06870 262 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 LINGO3P0C6S8 592 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 CECR9P0C854 216 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 SLC7A1P30825 629 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 TIA1P31483 386 aaKnown RBP eCLIP8.03□□□□□ -1.12
NEDD1-211ENST00000557454 NTF4P34130 210 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 MTNR1AP48039 350 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 PRIM2P49643 509 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 PHEXP78562 749 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 CRYMQ14894 314 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 SULT1C3Q6IMI6 304 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 C4orf22Q6V702 233 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 CNTN4Q8IWV2 1026 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 TXLNBQ8N3L3 684 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 UBL4BQ8N7F7 174 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 LRRC57Q8N9N7 239 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF527Q8NB42 609 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 OR4F15Q8NGB8 312 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 LINC01006Q8NI28 216 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ACTRT2Q8TDY3 377 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF681Q96N22 645 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ANKRD27Q96NW4 1050 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 SLC30A2Q9BRI3 323 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF416Q9BWM5 594 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 EMC3Q9P0I2 261 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 REV1Q9UBZ9 1251 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 DCTN4Q9UJW0 460 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF780BQ9Y6R6 833 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 IGKV3D-15A0A087WSY6 115 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 LCE6AA0A183 80 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ALG1L2C9J202 215 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 M0R233 179 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ERLIN1O75477 346 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CDH2P19022 906 aaPredicted RBP8.02□□□□□ -1.13
NEDD1-211ENST00000557454 GP5P40197 560 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 EIF1P41567 113 aaKnown RBP8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 PIK3CGP48736 1102 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ALDH9A1P49189 494 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 MAPK12P53778 367 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 POU3F1Q03052 451 aaPredicted RBP8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CD69Q07108 199 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CCNYL2Q5T2Q4 361 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ABLIM2Q6H8Q1 611 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ANKRD16Q6P6B7 361 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 GSTA5Q7RTV2 222 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 GSPT2Q8IYD1 628 aaKnown RBP8.02□□□□□ -1.13
NEDD1-211ENST00000557454 OR7G2Q8NG99 324 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 FBXO27Q8NI29 283 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 EXT2Q93063 718 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ERP27Q96DN0 273 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CHIAQ9BZP6 476 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CD244Q9BZW8 370 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 MARCH7Q9H992 704 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 TAS2R9Q9NYW1 312 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 CD274Q9NZQ7 290 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 IFNKQ9P0W0 207 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 ZNF232Q9UNY5 417 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
NEDD1-211ENST00000557454 OR6C65A6NJZ3 312 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 VSTM5A8MXK1 200 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 H0YL77 283 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 KIF2AO00139 706 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 SYNGR3O43761 229 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MFAP3LO75121 409 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 ULK1O75385 1050 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 SEMA3DO95025 777 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 OXSR1O95747 527 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 IGKV1D-16P01601 117 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 LTA4HP09960 611 aaKnown RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 FAM157BP0CG42 384 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 IGHV4-38-2P0DP08 117 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MLNP12872 115 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MAGEA6P43360 314 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 SEC24CP53992 1094 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 TGFBR3Q03167 851 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 DBPQ10586 325 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 TRIP13Q15645 432 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MSMPQ1L6U9 139 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 CASP12Q6UXS9 341 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 PEX26Q7Z412 305 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 GALNT7Q86SF2 657 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MYPOPQ86VE0 399 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 GLB1L3Q8NCI6 653 aaPredicted RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 RNF214Q8ND24 703 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 CEP70Q8NHQ1 597 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 RAB8BQ92930 207 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 MRPL1Q9BYD6 325 aaKnown RBP8.01□□□□□ -1.13
NEDD1-211ENST00000557454 Q9N2J8 555 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 SLC6A13Q9NSD5 602 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 UPB1Q9UBR1 384 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 SEC14L4Q9UDX3 406 aa8.01□□□□□ -1.13
NEDD1-211ENST00000557454 ZNF716A6NP11 495 aa8□□□□□ -1.13
NEDD1-211ENST00000557454 SRRM5B3KS81 715 aa8□□□□□ -1.13
NEDD1-211ENST00000557454 ST8SIA5O15466 376 aa8□□□□□ -1.13
NEDD1-211ENST00000557454 PLOD3O60568 738 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms