RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TRAPPC13A5PLN9 417 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 SLC22A31A6NKX4 558 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 A8MUA0 341 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 GMDSO60547 372 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 UBL3O95164 117 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 EPXP11678 715 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 SOX9P48436 509 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 MMP15P51511 669 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 SUZ12Q15022 739 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 TMEM255AQ5JRV8 349 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 GPR139Q6DWJ6 353 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 NRROSQ86YC3 692 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 RPLP0P6Q8NHW5 317 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 HMGB4Q8WW32 186 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 NXPE2Q96DL1 559 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 BPIFA2Q96DR5 249 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 HHIPL1Q96JK4 782 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 RBP7Q96R05 134 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 RBCK1Q9BYM8 510 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 CACYBPQ9HB71 228 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 CMC2Q9NRP2 79 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 TMEM74BQ9NUR3 256 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 DEC1Q9P2X7 70 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 KCNE5Q9UJ90 142 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 ACSL5Q9ULC5 683 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 SLC27A6Q9Y2P4 619 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 ATG2BQ96BY7 2078 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 DUXAA6NLW8 204 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 LRRN3E7EW58 273 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 ADH1CP00326 375 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 CLTBP09497 229 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 ZNF888P0CJ79 500 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 SULT1A3P0DMM9 295 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 SULT1A4P0DMN0 295 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 NDUFS1P28331 727 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 HSF2Q03933 536 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 DMKNQ6E0U4 476 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 Q6ZTK2 550 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 KANSL1Q7Z3B3 1105 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 RANBP3LQ86VV4 465 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 SERPINA12Q8IW75 414 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 GPALPP1Q8IXQ4 340 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 ETFBKMTQ8IXQ9 262 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 TMEFF1Q8IYR6 380 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 OR2L8Q8NGY9 312 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 ZCCHC10Q8TBK6 192 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 ZMYND19Q96E35 227 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 C10orf90Q96M02 699 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 C1QTNF6Q9BXI9 259 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 LRRN3Q9H3W5 708 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 WDR26Q9H7D7 661 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 CAPN10Q9HC96 672 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 WSB2Q9NYS7 404 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 AUP1Q9Y679 476 aa10.54□□□□□ -0.72
SRP54-213ENST00000556994 TP53BP1Q12888 1972 aaPredicted RBP10.54□□□□□ -0.72
SRP54-213ENST00000556994 GDNFP39905 211 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MAGEB1P43366 347 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 NRG3P56975 720 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 PUDPQ08623 228 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 CEBPEQ15744 281 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 GRK1Q15835 563 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 AANATQ16613 207 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 TMEM65Q6PI78 240 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 RTL4Q6ZR62 310 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 BTN2A1Q7KYR7 527 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 NLRC3Q7RTR2 1065 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 ASPGQ86U10 573 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 LRRC25Q8N386 305 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 OR4C6Q8NH72 309 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 ZNF671Q8TAW3 534 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 SUSD6Q92537 303 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MS4A4EQ96PG1 132 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 DERL3Q96Q80 235 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 OR14A2Q96R54 314 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 C20orf85Q9H1P6 137 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MEPEQ9NQ76 525 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 PRSS16Q9NQE7 514 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 SERGEFQ9UGK8 458 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 UBQLN2Q9UHD9 624 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 ST6GALNAC2Q9UJ37 374 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MRPS23Q9Y3D9 190 aaKnown RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 TBC1D3BA6NDS4 549 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 RIIAD1A6NNX1 92 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 G3V3Q6 166 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MID1O15344 667 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 PRICKLE3O43900 615 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 RNGTTO60942 597 aaKnown RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 RCBTB2O95199 551 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms