RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 POMZP3Q6PJE2 187 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 HMGN2P46Q86SG4 172 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 ADGRE4PQ86SQ3 457 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 KIF18BQ86Y91 864 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 FUNDC1Q8IVP5 155 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 OR10D3Q8NH80 312 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 FNDC9Q8TBE3 224 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 QRSL1Q9H0R6 528 aaKnown RBP12.68□□□□□ -0.38
SLIRP-207ENST00000556831 SLC38A1Q9H2H9 487 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 EXOSC3Q9NQT5 275 aaKnown RBP12.68□□□□□ -0.38
SLIRP-207ENST00000556831 PACSIN3Q9UKS6 424 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 EMC9Q9Y3B6 208 aa12.68□□□□□ -0.38
SLIRP-207ENST00000556831 HCFC1P51610 2035 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 PKDREJQ9NTG1 2253 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 NDUFAB1O14561 156 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 HNRNPCL1O60812 293 aaKnown RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 TGM6O95932 706 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 OPN1LWP04000 364 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 NID1P14543 1247 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 SSTR2P30874 369 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 PGM1P36871 562 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 CTBP2P56545 445 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 CARD18P57730 90 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 NFYCQ13952 458 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 MMEL1Q495T6 779 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 LRIF1Q5T3J3 769 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 GTF2IRD2BQ6EKJ0 949 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 LUZP2Q86TE4 346 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 GTF2IRD2Q86UP8 949 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 GGNQ86UU5 652 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 RELL2Q8NC24 303 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 FIG4Q92562 907 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 CPNE4Q96A23 557 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 TMEM19Q96HH6 336 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF845Q96IR2 970 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-207ENST00000556831 NPAS1Q99742 590 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 CCDC134Q9H6E4 229 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 IFT52Q9Y366 437 aa12.67□□□□□ -0.38
SLIRP-207ENST00000556831 A0A1W2PNV4 684 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 CXCL13O43927 109 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 CPOXP36551 454 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 HTR3AP46098 478 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 COPZ1P61923 177 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SIRPAP78324 504 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 TFF3Q07654 80 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SF3A3Q12874 501 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 PAGE3Q5JUK9 113 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 FAM71CQ8NEG0 241 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 POC1BQ8TC44 478 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SLC38A5Q8WUX1 472 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF559Q9BR84 538 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SPATA5L1Q9BVQ7 753 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 NSRP1Q9H0G5 558 aaKnown RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 ENKD1Q9H0I2 346 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 FANCFQ9NPI8 374 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 NPDC1Q9NQX5 325 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-207ENST00000556831 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 SLC13A4Q9UKG4 626 aa12.66□□□□□ -0.38
SLIRP-207ENST00000556831 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 PRAMEF27A3QJZ7 478 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 CFAP73A6NFT4 308 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 THBS1P07996 1170 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 TFPIP10646 304 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 SLC6A2P23975 617 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 PSMA4P25789 261 aaKnown RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 FKBP2P26885 142 aaKnown RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 APOBEC1P41238 236 aaKnown RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 KCNJ5P48544 419 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 MVDP53602 400 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 SESN3P58005 492 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms