RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PANX1Q96RD7 426 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SDF2Q99470 211 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 NMUR2Q9GZQ4 415 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TMEM185BQ9H7F4 350 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 MANSC1Q9H8J5 431 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 MEAF6Q9HAF1 191 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SERINC1Q9NRX5 453 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 FBXO34Q9NWN3 711 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 ST6GALNAC2Q9UJ37 374 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TEP1Q99973 2627 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SHISA8B8ZZ34 492 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TNFSF11O14788 317 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 KITP10721 976 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 IDO1P14902 403 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SFTPDP35247 375 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CD79BP40259 229 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 KIR2DL2P43627 348 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 MAGOHP61326 146 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TXNL4AP83876 142 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ID3Q02535 119 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 FAM27E3Q08E93 113 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 RNPS1Q15287 305 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 EXOC3L2Q2M3D2 409 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TMEM44Q2T9K0 475 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 FAM174BQ3ZCQ3 159 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 BEND4Q6ZU67 534 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZAR1Q86SH2 424 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ANKRD46Q86W74 232 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 GOLGA6L1Q8N7Z2 621 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OR5D16Q8NGK9 328 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OR5W2Q8NH69 310 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OIT3Q8WWZ8 545 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 NANOS1Q8WY41 292 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CPNE4Q96A23 557 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZBTB9Q96C00 473 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SLC35G5Q96KT7 338 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 MRGPRX4Q96LA9 322 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 KLHL15Q96M94 604 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SORT1Q99523 831 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 C20orf27Q9GZN8 174 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 PNPOQ9NVS9 261 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 MARCOQ9UEW3 520 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 HAO1Q9UJM8 370 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 WDR45Q9Y484 360 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 HIVEP1P15822 2718 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TMEM247A6NEH6 219 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SERINC4A6NH21 518 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 B4DXG7 233 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF195O14628 629 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SHOXO15266 292 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TMPRSS2O15393 492 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CXCL13O43927 109 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ANP32DO95626 131 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CSTAP01040 98 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OPN1LWP04000 364 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 IL6P05231 212 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 LINGO3P0C6S8 592 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 PPP3CBP16298 524 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 PGCP20142 388 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CD247P20963 164 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 FKBP2P26885 142 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 UGT2B10P36537 528 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 KHKP50053 298 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 IST1P53990 364 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF117Q03924 483 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CD226Q15762 336 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ARHGAP11BQ3KRB8 267 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 TMEM176BQ3YBM2 270 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 GPAT3Q53EU6 434 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 PDZK1Q5T2W1 519 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OGFOD2Q6N063 350 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 VWA1Q6PCB0 445 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF621Q6ZSS3 439 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 GGNQ86UU5 652 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZBTB46Q86UZ6 589 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CLECL1Q8IZS7 167 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SLC43A2Q8N370 569 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 ATP6V1C2Q8NEY4 427 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OR6K3Q8NGY3 331 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 MIPOL1Q8TD10 442 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OR52E6Q96RD3 313 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 FOXC2Q99958 501 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SLC35A5Q9BS91 424 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 KLHL4Q9C0H6 718 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 OPN3Q9H1Y3 402 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 IFT22Q9H7X7 185 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CACYBPQ9HB71 228 aaKnown RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 POLE3Q9NRF9 147 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 PLSCR4Q9NRQ2 329 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 CCM2LQ9NUG4 571 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 MKLN1Q9UL63 735 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 LIPT1Q9Y234 373 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SLC35A3Q9Y2D2 325 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SPEF1Q9Y4P9 236 aa6.57□□□□□ -1.36
SCFD1-222ENST00000556768 SPIN1Q9Y657 262 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-222ENST00000556768 VPS13CQ709C8 3753 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms