RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ELK3P41970 407 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ALDH3B2P48448 385 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CCT3P49368 545 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 PRELPP51888 382 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SH3BGRP55822 239 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 IFFO1Q0D2I5 559 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 KCNJ11Q14654 390 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 LAGE3Q14657 143 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 LTB4RQ15722 352 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 DPYSL2Q16555 572 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 IMMTQ16891 758 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SLC5A12Q1EHB4 618 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 TIPARPQ7Z3E1 657 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CTAGE6Q86UF2 777 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 GTSCR1Q86UQ5 136 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 TPRA1Q86W33 373 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 Q8N377 158 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 OR2T33Q8NG76 320 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 OR56B2PQ8NGI1 322 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CCDC26Q8TAB7 109 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ITLN1Q8WWA0 313 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF689Q96CS4 500 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 RBM4BQ9BQ04 359 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ELOVL4Q9GZR5 314 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 LRRN3Q9H3W5 708 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ZSCAN16Q9H4T2 348 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 VPS37BQ9H9H4 285 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 TM9SF3Q9HD45 589 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 PNO1Q9NRX1 252 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CUTCQ9NTM9 273 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SMOXQ9NWM0 555 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 PYCARDQ9ULZ3 195 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SAMD4AQ9UPU9 718 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 PRSS21Q9Y6M0 314 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CACNA1FO60840 1977 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 RPRD2Q5VT52 1461 aaKnown RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 FYCO1Q9BQS8 1478 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 PRXQ9BXM0 1461 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 WIZO95785 1651 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 A0A0U1RQS6 177 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 XKRY2A2RUG3 117 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 HELTA6NFD8 242 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 ACOD1A6NK06 481 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 SHISA9B4DS77 424 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 B4DXG7 233 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 E7ESA3 106 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 F5H6K3 240 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 H3BMQ9 156 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 GOLGA8SH3BPF8 625 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 SGK1O00141 431 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 FCN1O00602 326 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 TAPBPO15533 448 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 FCMRO60667 390 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 KBTBD11O94819 623 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CA1P00915 261 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CD55P08174 381 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 UMPSP11172 480 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 POU2F1P14859 743 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 IDSP22304 550 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 PTBP1P26599 531 aaKnown RBP eCLIP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 OR1D4P47884 311 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 P2RY1P47900 373 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CD151P48509 253 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 FNTAP49354 379 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 PSMD7P51665 324 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 EFNA3P52797 238 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CDH4P55283 916 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 DSCR10P59022 87 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 KLRC3Q07444 240 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF154Q13106 437 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 DYNC1I2Q13409 638 aaKnown RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF57Q68EA5 555 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-210ENST00000556718 PVRIGQ6DKI7 326 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 VITQ6UXI7 678 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 SLC35F2Q8IXU6 374 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CSNK1A1LQ8N752 337 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 TRPV1Q8NER1 839 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 OR8J1Q8NGP2 316 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 AKR7LQ8NHP1 331 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 RNF139Q8WU17 664 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 CFAP53Q96M91 514 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 OR5M11Q96RB7 305 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 COPS8Q99627 209 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 VGLL1Q99990 258 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 UBXN6Q9BZV1 441 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 MAGT1Q9H0U3 335 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF385DQ9H6B1 395 aa3.41□□□□□ -1.86
PRPF39-210ENST00000556718 SMYD3Q9H7B4 428 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms