RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 GLRX2Q9NS18 164 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 DCDC2Q9UHG0 476 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 CLEC4AQ9UMR7 237 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 PROCRQ9UNN8 238 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 LIPT1Q9Y234 373 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 MAGED1Q9Y5V3 778 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 U3KQE9 123 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 IGHV4-30-2A0A087WSY4 118 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 G3V2L1 256 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 H3BML4 177 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 RIPK2O43353 540 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 URI1O94763 535 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 UTS2O95399 124 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 ANGPTL1O95841 491 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 IGKV1D-16P01601 117 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 PSMB1P20618 241 aaKnown RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 DNAJB13P59910 316 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 SLC29A2Q14542 456 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 CTU2Q2VPK5 515 aaKnown RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 VPS26BQ4G0F5 336 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 SPDYAQ5MJ70 313 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 SH2D4BQ5SQS7 431 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 NOXRED1Q6NXP6 359 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 ZYG11AQ6WRX3 759 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 STAC2Q6ZMT1 411 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 MARCH3Q86UD3 253 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 EXOC3L1Q86VI1 746 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF619Q8N2I2 560 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 CDRT4Q8N9R6 151 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 FAM156AQ8NDB6 213 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 LILRB1Q8NHL6 650 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 FAM110BQ8TC76 370 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 ZBTB8AQ96BR9 441 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 TRMT61AQ96FX7 289 aaKnown RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 TXLNGYQ9BZA5 131 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 MID1IP1Q9NPA3 183 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 RRAGDQ9NQL2 400 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-220ENST00000556486 CDC42EP3Q9UKI2 254 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 EMCNQ9ULC0 261 aa8.91□□□□□ -0.98
SCFD1-220ENST00000556486 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 UQCRHLA0A096LP55 91 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 A0A1W2PQD3 144 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 FAM234BA2RU67 622 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 SSX4O60224 188 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 HSPA4LO95757 839 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 CLEC2LP0C7M8 214 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PRPS2P11908 318 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 GABRA3P34903 492 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 SLC6A8P48029 635 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 MANFP55145 182 aaKnown RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 BTKQ06187 659 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 STX5Q13190 355 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PDE7AQ13946 482 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 TSC22D1Q15714 1073 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PLPPR5Q32ZL2 321 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 ADAM5Q6NVV9 412 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 ZCCHC12Q6PEW1 402 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 ESPNLQ6ZVH7 1005 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 MISPQ8IVT2 679 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 ANKRD42Q8N9B4 389 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 OR4C3Q8NH37 302 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 OR10D3Q8NH80 312 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 CEP70Q8NHQ1 597 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PPP1R35Q8TAP8 253 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 GIMAP5Q96F15 307 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 CCT7Q99832 543 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PLA2G12AQ9BZM1 189 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 IQCGQ9H095 443 aaKnown RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 FANCFQ9NPI8 374 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 ACSS1Q9NUB1 689 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 PSMC3IPQ9P2W1 217 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 GPR52Q9Y2T5 361 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 POLR3HQ9Y535 204 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-220ENST00000556486 TENM1Q9UKZ4 2725 aa8.9□□□□□ -0.98
SCFD1-220ENST00000556486 A0A1W2PRB8 838 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 GXYLT2A0PJZ3 443 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 OVOL3O00110 214 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 GMFGO60234 142 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 GLRA3O75311 464 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 TUSC2O75896 110 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 NTN1O95631 604 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 OXSR1O95747 527 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-220ENST00000556486 UROSP10746 265 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 ELK4P28324 431 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 CASP9P55211 416 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 EGR3Q06889 387 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF844Q08AG5 666 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 KRT72Q14CN4 511 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 SGCBQ16585 318 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 IMPG1Q17R60 797 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 CPTPQ5TA50 214 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF551Q7Z340 670 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-220ENST00000556486 KBTBD8Q8NFY9 601 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 OR6Y1Q8NGX8 325 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 OR2V1Q8NHB1 315 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 SMAP2Q8WU79 429 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-220ENST00000556486 EGLN2Q96KS0 407 aa8.89□□□□□ -0.99
SCFD1-220ENST00000556486 C16orf45Q96MC5 204 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-220ENST00000556486 HS6ST2Q96MM7 605 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms