RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GJE1A6NN92 205 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ABCD4O14678 606 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FCMRO60667 390 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 NUDT14O95848 222 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CCT5P48643 541 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CDH11P55287 796 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HBA1P69905 142 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 MAPK14Q16539 360 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TIGD2Q4W5G0 525 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PDZK1Q5T2W1 519 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C6orf52Q5T4I8 152 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 R3HCC1LQ7Z5L2 792 aaKnown RBP12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C4orf33Q8N1A6 199 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 EPS8L3Q8TE67 593 aaKnown RBP12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HTRA1Q92743 480 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR7D2Q96RA2 312 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TRMOQ9BU70 441 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TRAF6Q9Y4K3 522 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SLC25A15Q9Y619 301 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SERINC4A6NH21 518 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ELOA3DA6NLF2 546 aaPredicted RBP12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF264O43296 627 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SSX4O60224 188 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TRIM13O60858 407 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 UGT2B17O75795 530 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 KRT4P19013 534 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ATP6V1C1P21283 382 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 DIO1P49895 249 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SESN3P58005 492 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 STK11Q15831 433 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF141Q15928 474 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMEM249Q2WGJ8 235 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ELOA3BQ3SY89 546 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ARL13AQ5H913 290 aaPredicted RBP12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C6orf136Q5SQH8 315 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 AP1ARQ63HQ0 302 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PODNL1Q6PEZ8 512 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ELOA3Q8NG57 546 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR56A1Q8NGH5 318 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SFXN5Q8TD22 340 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR5B2Q96R09 309 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C1orf50Q9BV19 199 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 THUMPD3Q9BV44 507 aaKnown RBP12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MECRQ9BV79 373 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CACNG6Q9BXT2 260 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FAM234BA2RU67 622 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PDLIM1O00151 329 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 GTPBP1O00178 669 aaKnown RBP12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 COPEO14579 308 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PEX11AO75192 247 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 IGHV3-9P01782 118 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TP53P04637 393 aaPredicted RBP12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FESP07332 822 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 UBL4AP11441 157 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 GGT1P19440 569 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SLC7A1P30825 629 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TTKP33981 857 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 HPCAL1P37235 193 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C3orf33Q6P1S2 294 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 P2RY8Q86VZ1 359 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 DDIASQ8IXT1 998 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CNPY4Q8N129 248 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF614Q8N883 585 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RFWD2Q8NHY2 731 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 HS6ST2Q96MM7 605 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF350Q9GZX5 532 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 LAT2Q9GZY6 243 aa12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FAF1Q9UNN5 650 aaPredicted RBP12.63□□□□□ -0.39
CHMP4BP1-201ENST00000556017 H3BNH8 94 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PHF1O43189 567 aaPredicted RBP12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 NPHS1O60500 1241 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SCN2BO60939 215 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C1QCP02747 245 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 VLDLRP98155 873 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SLC25A3Q00325 362 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 LOXL1Q08397 574 aaPredicted RBP12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FUT5Q11128 374 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms