RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 IGHV3-64DA0A0J9YX35 117 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 PP2D1A8MPX8 630 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 DUX1O43812 170 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 JAK2O60674 1132 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 ECI2O75521 394 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 P04436 131 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 DPP4P27487 766 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 BDKRB1P46663 353 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 ZNF136P52737 540 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 ATXN7L3Q14CW9 347 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-216ENST00000555550 C6orf89Q6UWU4 347 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 LINC01561Q8N1V8 128 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 RNF148Q8N7C7 305 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 OR8H1Q8NGG4 311 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 OR2L8Q8NGY9 312 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 OR6X1Q8NH79 312 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 HPDLQ96IR7 371 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 GAL3ST1Q99999 423 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 SPATA16Q9BXB7 569 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 ROPN1Q9HAT0 212 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-216ENST00000555550 EML4Q9HC35 981 aaKnown RBP2.11□□□□□ -2.07
SCFD1-216ENST00000555550 YAE1D1Q9NRH1 226 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 WRAP73Q9P2S5 460 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-216ENST00000555550 RNF6Q9Y252 685 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 OARD1Q9Y530 152 aa2.11□□□□□ -2.07
SCFD1-216ENST00000555550 KIR2DL5BA0A0G2JN68 375 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 KIR2DL5BA0A0G2JPC4 375 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 TMEM150BA6NC51 233 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ANKRD30BLA7E2S9 258 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 C11orf94C9JXX5 98 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 STX7O15400 261 aaKnown RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 SPAG7O75391 227 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 TNFSF13O75888 250 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 BCAS2O75934 225 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 MT-ATP6P00846 226 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 CA3P07451 260 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 PNMA6AP0CW24 399 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 TBPP20226 339 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ATXN3P54252 364 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 SELENOTP62341 195 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 CUL1Q13616 776 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ARL6IP1Q15041 203 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 CASC10Q5T4H9 136 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ACSM5Q6NUN0 579 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 FAHD2BQ6P2I3 314 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 FAM199XQ6PEV8 388 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 RABEPKQ7Z6M1 372 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ANKRD37Q7Z713 158 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 KIR2DL5AQ8N109 375 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 MSANTD4Q8NCY6 345 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 OR56B1Q8NGI3 324 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 PAQR8Q8TEZ7 354 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 SLC13A3Q8WWT9 602 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 FAHD2AQ96GK7 314 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 CEP170P1Q96L14 293 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ATP6V0BQ99437 205 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 TSG101Q99816 390 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 DUSP16Q9BY84 665 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 THAP9Q9H5L6 903 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ZNF385DQ9H6B1 395 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 B3GNT2Q9NY97 397 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 WARS2Q9UGM6 360 aaKnown RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 ANAPC7Q9UJX3 599 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 NOL7Q9UMY1 257 aaKnown RBP2.1□□□□□ -2.07
SCFD1-216ENST00000555550 FOXJ3Q9UPW0 622 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 MAD1L1Q9Y6D9 718 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 MAP3K15Q6ZN16 1313 aa2.1□□□□□ -2.07
SCFD1-216ENST00000555550 A0A0G2JRQ6 117 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 FAM230AA0A1W2PPH8 454 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 LAD1O00515 517 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 GNA14O95837 355 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 IGKV1-17P01599 117 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TSPY4P0CV99 314 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TSPY10P0CW01 314 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 CRISP2P16562 243 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 HOXA9P31269 272 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 NAPAP54920 295 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TAS2R19P59542 299 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 RIPPLY1Q0D2K3 151 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 LY6EQ16553 131 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 NRF1Q16656 503 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TIGITQ495A1 244 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 ATL3Q6DD88 541 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 COX15Q7KZN9 410 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 C16orf62Q7Z3J2 963 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 MINDY2Q8NBR6 621 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 FAM71CQ8NEG0 241 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 ZNF596Q8TC21 504 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 STARD8Q92502 1023 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TMEM186Q96B77 213 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 KLHDC3Q9BQ90 382 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 GSDMCQ9BYG8 508 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 TPK1Q9H3S4 243 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 SPACA6W5XKT8 324 aa2.09□□□□□ -2.07
SCFD1-216ENST00000555550 IGHV3OR16-13A0A075B7E8 117 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 E7ESA3 106 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 AIREO43918 545 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 TOM1L1O75674 476 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 UGT2B17O75795 530 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms