RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 LINC01561Q8N1V8 128 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 OR52E1Q8NGJ3 308 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 URGCPQ8TCY9 931 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 PAQR8Q8TEZ7 354 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 GIMAP1Q8WWP7 306 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 KRT35Q92764 455 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 RAB7BQ96AH8 199 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 CEP170P1Q96L14 293 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 PGLYRP4Q96LB8 373 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 KCNA7Q96RP8 456 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 SPIN2AQ99865 258 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 SPIN2BQ9BPZ2 258 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 KLHDC3Q9BQ90 382 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 SLC30A2Q9BRI3 323 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 LHX9Q9NQ69 397 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 MRPL39Q9NYK5 338 aaKnown RBP1.73□□□□□ -2.13
SNX6-204ENST00000555541 ASF1AQ9Y294 204 aa1.73□□□□□ -2.13
SNX6-204ENST00000555541 COL5A1P20908 1838 aaPredicted RBP1.73□□□□□ -2.13
SNX6-204ENST00000555541 GPR179Q6PRD1 2367 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 A0A0U1RQS6 177 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 WASH3PC4AMC7 463 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 LGALS8O00214 317 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 LAD1O00515 517 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 SPAG7O75391 227 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 PNPP00491 289 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 CLUP10909 449 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 DPP4P27487 766 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 OSTNP61366 133 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 CSTF1Q05048 431 aaKnown RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 ACTN3Q08043 901 aaPredicted RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 PDIA5Q14554 519 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 C2orf76Q3KRA6 126 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 C5orf47Q569G3 176 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 PIGGQ5H8A4 983 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 UNC5DQ6UXZ4 953 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 WASH2PQ6VEQ5 465 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 WDR88Q6ZMY6 472 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 ZNF836Q6ZNA1 936 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 C6orf120Q7Z4R8 191 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 ANKRD37Q7Z713 158 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 ANKRD23Q86SG2 305 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 OR10G2Q8NGC3 310 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 CNIH3Q8TBE1 160 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 SELENOMQ8WWX9 145 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 ATP6V1E2Q96A05 226 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 HDHD3Q9BSH5 251 aaPredicted RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 TMEM231Q9H6L2 316 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 CNOT2Q9NZN8 540 aaKnown RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 OPN4Q9UHM6 478 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 RNF6Q9Y252 685 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 STRAPQ9Y3F4 350 aaKnown RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 WIF1Q9Y5W5 379 aa1.72□□□□□ -2.13
SNX6-204ENST00000555541 DHX57Q6P158 1386 aaKnown RBP1.72□□□□□ -2.13
SNX6-204ENST00000555541 IGHV3OR16-13A0A075B7E8 117 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 TNFSF13O75888 250 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ALPPP05187 535 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 MRPL3P09001 348 aaKnown RBP1.71□□□□□ -2.14
SNX6-204ENST00000555541 CHTF8P0CG12 524 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 HSPA1LP34931 641 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 BDKRB1P46663 353 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ATXN3P54252 364 aaPredicted RBP1.71□□□□□ -2.14
SNX6-204ENST00000555541 PSG5Q15238 335 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 CHI3L2Q15782 390 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 NRF1Q16656 503 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ADPRMQ3LIE5 342 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 Q5W150 140 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ETFRF1Q6IPR1 90 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ZSCAN25Q6NSZ9 544 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 FAHD2BQ6P2I3 314 aaPredicted RBP1.71□□□□□ -2.14
SNX6-204ENST00000555541 RALGPS2Q86X27 583 aaPredicted RBP1.71□□□□□ -2.14
SNX6-204ENST00000555541 C12orf56Q8IXR9 622 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 GCNT2Q8N0V5 402 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 C6orf223Q8N319 242 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ZNF709Q8N972 641 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 NPBQ8NG41 125 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 VMP1Q96GC9 406 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 FAHD2AQ96GK7 314 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 CABS1Q96KC9 395 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 CRNKL1Q9BZJ0 848 aaKnown RBP1.71□□□□□ -2.14
SNX6-204ENST00000555541 GPR61Q9BZJ8 451 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 OR11A1Q9GZK7 315 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 TREM2Q9NZC2 230 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 KIF25Q9UIL4 384 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 AP4B1Q9Y6B7 739 aa1.71□□□□□ -2.14
SNX6-204ENST00000555541 ARHGAP42A6NI28 874 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 DUX1O43812 170 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 OLFM2O95897 454 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 CENPBP07199 599 aaPredicted RBP1.7□□□□□ -2.14
SNX6-204ENST00000555541 UQCRC2P22695 453 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 AHCYP23526 432 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 CD80P33681 288 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 TAS2R19P59542 299 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 RIPPLY1Q0D2K3 151 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 C15orf54Q8N8G6 183 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 CYB561D1Q8N8Q1 229 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 MINDY2Q8NBR6 621 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 OR8H1Q8NGG4 311 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 OR51S1Q8NGJ8 323 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 ZNF2Q9BSG1 426 aaPredicted RBP1.7□□□□□ -2.14
SNX6-204ENST00000555541 DUSP16Q9BY84 665 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms