RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 LIME1Q9H400 295 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 TMEM185BQ9H7F4 350 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 RMND5AQ9H871 391 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 COQ10BQ9H8M1 238 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 MTHFD2LQ9H903 347 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 BCO1Q9HAY6 547 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 THUMPD1Q9NXG2 353 aaKnown RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 KLHL9Q9P2J3 617 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 KLHL13Q9P2N7 655 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 GPR52Q9Y2T5 361 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 SPIN1Q9Y657 262 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 F8P00451 2351 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 GOLGA8QA0A0J9YX86 632 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 GOLGA8OA6NCC3 632 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 AGAP5A6NIR3 686 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 DEFB108AA8MXU0 73 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 GOLGA8NF8WBI6 632 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 RFXANKO14593 260 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 H6PDO95479 791 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 OPN1LWP04000 364 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 YES1P07947 543 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 UBTFL6P0CB48 400 aaPredicted RBP10.56□□□□□ -0.72
VRK1-204ENST00000555351 SHC1P29353 583 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 HTR3AP46098 478 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 CCR4P51679 360 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 CSNK2A1P68400 391 aaPredicted RBP10.56□□□□□ -0.72
VRK1-204ENST00000555351 KCNJ10P78508 379 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 KEAP1Q14145 624 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 MAPK14Q16539 360 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 ZSWIM7Q19AV6 140 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 GPAT3Q53EU6 434 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 TMEM201Q5SNT2 666 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 NXNQ6DKJ4 435 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 PPP4R4Q6NUP7 873 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 STAC2Q6ZMT1 411 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 SSX8Q7RTT4 187 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 RNF130Q86XS8 419 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 TGIF2LYQ8IUE0 185 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 PIP5K1AQ99755 562 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 SRXN1Q9BYN0 137 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 SLC38A1Q9H2H9 487 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 TMEM45AQ9NWC5 275 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 BEX4Q9NWD9 120 aaPredicted RBP10.56□□□□□ -0.72
VRK1-204ENST00000555351 KLHL28Q9NXS3 571 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 CALML5Q9NZT1 146 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 PLEKHA6Q9Y2H5 1048 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 MPDZO75970 2070 aa10.56□□□□□ -0.72
VRK1-204ENST00000555351 CENPVL1A0A0U1RR11 272 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 PRAMEF27A3QJZ7 478 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ZNF724A8MTY0 619 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 UBDO15205 165 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 CNOT4O95628 575 aaKnown RBP10.55□□□□□ -0.72
VRK1-204ENST00000555351 DBIP07108 87 aaKnown RBP10.55□□□□□ -0.72
VRK1-204ENST00000555351 KITP10721 976 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 FPR1P21462 350 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 RPS4Y1P22090 263 aaKnown RBP10.55□□□□□ -0.72
VRK1-204ENST00000555351 RIPPLY3P57055 190 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 CHRNEQ04844 493 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 MERTKQ12866 999 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 P2RY6Q15077 328 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 PDK3Q15120 406 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 DEFB113Q30KQ7 82 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 NDUFAF6Q330K2 333 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 SLC9B1Q4ZJI4 515 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 EPGNQ6UW88 154 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ZNF621Q6ZSS3 439 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 TMPPEQ6ZT21 453 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 PLEKHM3Q6ZWE6 761 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 GRINAQ7Z429 371 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ZNF440Q8IYI8 595 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 STEAP2Q8NFT2 490 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 RFWD2Q8NHY2 731 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 STON2Q8WXE9 905 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ROBO4Q8WZ75 1007 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ITCHQ96J02 903 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 INPP5KQ9BT40 448 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 KLHL4Q9C0H6 718 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 CLEC4AQ9UMR7 237 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 HDGFL3Q9Y3E1 203 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 USH1CQ9Y6N9 552 aa10.55□□□□□ -0.72
VRK1-204ENST00000555351 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 IGKV3D-15A0A087WSY6 115 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 FAM234BA2RU67 622 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 SIAH2O43255 324 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 CYTIPO60759 359 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 TMCC2O75069 709 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 CYP7B1O75881 506 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 PMS2P2O95744 297 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 UQCRBP14927 111 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 FOSL1P15407 271 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 CD53P19397 219 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 ENPP1P22413 925 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms