RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CYP7B1O75881 506 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 NUDT14O95848 222 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CST1P01037 141 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 LDLRP01130 860 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FABP3P05413 133 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 HPNP05981 417 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 THBS1P07996 1170 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 RFPL3SP0C7P2 107 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 UBTFL6P0CB48 400 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FCGR1AP12314 374 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 NID1P14543 1247 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 HOXB6P17509 224 aaKnown RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 DPP4P27487 766 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CCR4P51679 360 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 TDGF1P3P51864 188 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 HMGA2P52926 109 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CASP6P55212 293 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 DSCR4P56555 118 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 EEF1A1P68104 462 aaKnown RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FOXK1P85037 733 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FGFBP1Q14512 234 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CD226Q15762 336 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 NPTX1Q15818 432 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 EIPR1Q53HC9 387 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 DHRS4L2Q6PKH6 230 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 APOOLQ6UXV4 268 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FKBP9P1Q75LS8 142 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 HS3ST5Q8IZT8 346 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FADS6Q8N9I5 356 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 TOR1AIP2Q8NFQ8 470 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 OR2M3Q8NG83 312 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 OR52P1PQ8NH57 321 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 PHF10Q8WUB8 498 aaKnown RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 NTNG2Q96CW9 530 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 C1GALT1C1Q96EU7 318 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF300Q96RE9 604 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ARHGDIGQ99819 225 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CIB1Q99828 191 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 PINK1Q9BXM7 581 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 KLHL4Q9C0H6 718 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 OR2B2Q9GZK3 357 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 DEFB127Q9H1M4 99 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 UBQLN3Q9H347 655 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 DSN1Q9H410 356 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ACER3Q9NUN7 267 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 TAS2R10Q9NYW0 307 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 MED11Q9P086 117 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 FBXL2Q9UKC9 423 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 SLC13A4Q9UKG4 626 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 SH3GLB1Q9Y371 365 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 OR14I1A6ND48 311 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SAC3D1A6NKF1 404 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 GMFGO60234 142 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SUSD5O60279 629 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 IGHG3P01860 377 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 CELA3AP09093 270 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ABOP16442 354 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 HK1P19367 917 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 PRKAR1BP31321 381 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ADH7P40394 386 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 YAP1P46937 504 aaKnown RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SLC6A8P48029 635 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 LIMS1P48059 325 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 P2RX1P51575 399 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF117Q03924 483 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 CBFBQ13951 182 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 NRF1Q16656 503 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF311Q5JNZ3 666 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 RNF220Q5VTB9 566 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 RAET1LQ5VY80 246 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 OR2T5Q6IEZ7 315 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 TRILQ7L0X0 811 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 CARM1Q86X55 608 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF440Q8IYI8 595 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 FAM83FQ8NEG4 500 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 OR4C15Q8NGM1 316 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 OR2T29Q8NH02 315 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 NEIL3Q8TAT5 605 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ZBTB8AQ96BR9 441 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SARAFQ96BY9 339 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SFXN2Q96NB2 322 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 PIGQQ9BRB3 760 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 TACO1Q9BSH4 297 aaKnown RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 FUZQ9BT04 418 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 BDH2Q9BUT1 245 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 RTN4RQ9BZR6 473 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 LAT2Q9GZY6 243 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 SLC6A15Q9H2J7 730 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 YY1AP1Q9H869 796 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 RLIMQ9NVW2 624 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ACAD8Q9UKU7 415 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 BAG5Q9UL15 447 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 OAZ3Q9UMX2 235 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF443Q9Y2A4 671 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms