RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF71Q9NQZ8 489 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 TUBA8Q9NY65 449 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 WIF1Q9Y5W5 379 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 A0A0B4J2E0 115 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 A0A1B0GX12 115 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 KPNA4O00629 521 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 DPM1O60762 260 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 SLC25A12O75746 678 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 NUDT14O95848 222 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 ALPLP05186 524 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 LINGO3P0C6S8 592 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 DAPP51397 102 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 PPP2R2BQ00005 443 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 FOXO1Q12778 655 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 RNFT1Q5M7Z0 435 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 ARSKQ6UWY0 536 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 ZNF550Q7Z398 422 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 GALNTL5Q7Z4T8 443 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 GALNT5Q7Z7M9 940 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 OR10G2Q8NGC3 310 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 OR5M1Q8NGP8 315 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 SNRNP27Q8WVK2 155 aaKnown RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 HAS2Q92819 552 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 JSRP1Q96MG2 331 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 FEVQ99581 238 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 NIPSNAP1Q9BPW8 284 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 ZNF559Q9BR84 538 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 C9orf16Q9BUW7 83 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 ANGPTL4Q9BY76 406 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 LAT2Q9GZY6 243 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 DSN1Q9H410 356 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 EXOSC3Q9NQT5 275 aaKnown RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 TEKT2Q9UIF3 430 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 TMEFF2Q9UIK5 374 aaPredicted RBP9.79□□□□□ -0.84
TDP1-211ENST00000555178 TP53TG5Q9Y2B4 290 aa9.79□□□□□ -0.84
TDP1-211ENST00000555178 A0A087WUU8 490 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 A0A1W2PRQ8 180 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 SH3PXD2BA1X283 911 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 TRAPPC13A5PLN9 417 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 LRRC3CA6NJW4 275 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 TP53I11O14683 189 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ZNHIT1O43257 154 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OR5F1O95221 314 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 SNAP29O95721 258 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 TNFSF10P50591 281 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 HMGA2P52926 109 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ARG2P78540 354 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 DAG1Q14118 895 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 DGCR6Q14129 220 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 MICAQ29983 383 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ZIK1Q3SY52 487 aaPredicted RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 ALG10BQ5I7T1 473 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ZNF770Q6IQ21 691 aaPredicted RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 PPP4R4Q6NUP7 873 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 POMZP3Q6PJE2 187 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 SVOPLQ8N434 492 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 RBMXL3Q8N7X1 1067 aaKnown RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 PFN4Q8NHR9 129 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 B4GALNT2Q8NHY0 566 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 C3orf49Q96BT1 292 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 DNAJA3Q96EY1 480 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 GPA33Q99795 319 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OSBPL10Q9BXB5 764 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 PRORYQ9H606 182 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 PPP4R1LQ9P1A2 415 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 VDAC3Q9Y277 283 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ZFYVE26Q68DK2 2539 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 CACNA1BQ00975 2339 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 FMO6PO60774 539 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 TRIM3O75382 744 aaPredicted RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 CCNB2O95067 398 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 SP1P08047 785 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 CELA3AP09093 270 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 UGT2B15P54855 530 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ST3GAL3Q11203 375 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 DCST1Q5T197 706 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 HIPK1Q86Z02 1210 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 LSMEM1Q8N8F7 131 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 EXD3Q8N9H8 876 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ATG16L2Q8NAA4 619 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 AQP11Q8NBQ7 271 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OR2M3Q8NG83 312 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OR4K5Q8NGD3 323 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OR5W2Q8NH69 310 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 ZNF563Q8TA94 476 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 GIPC3Q8TF64 312 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 OIT3Q8WWZ8 545 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 GTPBP3Q969Y2 492 aaKnown RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 SDCCAG3Q96C92 435 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 UBL7Q96S82 380 aaPredicted RBP9.78□□□□□ -0.84
TDP1-211ENST00000555178 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.78□□□□□ -0.84
TDP1-211ENST00000555178 TMEM27Q9HBJ8 222 aa9.78□□□□□ -0.84
TDP1-211ENST00000555178 PEX1O43933 1283 aa9.77□□□□□ -0.85
TDP1-211ENST00000555178 OR10H3O60404 316 aa9.77□□□□□ -0.85
TDP1-211ENST00000555178 GASTP01350 101 aa9.77□□□□□ -0.85
TDP1-211ENST00000555178 FUT1P19526 365 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms