RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR4D9Q8NGE8 314 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 OR2A12Q8NGT7 310 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 FAM110BQ8TC76 370 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 RAPGEF5Q92565 580 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 TIMD4Q96H15 378 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 C7orf34Q96L11 122 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 CNOT6LQ96LI5 555 aaKnown RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 TBX15Q96SF7 602 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 TMEM43Q9BTV4 400 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 RNF126Q9BV68 326 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 DEFB126Q9BYW3 111 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 LRRN3Q9H3W5 708 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 LRRC40Q9H9A6 602 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 SMOXQ9NWM0 555 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 AIPL1Q9NZN9 384 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 OR1A1Q9P1Q5 309 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 DPM3Q9P2X0 92 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 WARS2Q9UGM6 360 aaKnown RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 CDH9Q9ULB4 789 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 SCML2Q9UQR0 700 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 POLDIP2Q9Y2S7 368 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 AK6Q9Y3D8 172 aaKnown RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 SLCO1B1Q9Y6L6 691 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 IGLV3-10A0A075B6K4 115 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 TRAV26-1A0A087WT03 109 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SYNJ2BP-COX16A0A087WUM0 186 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 A0A1B0GUS0 222 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 A0A1B0GVL5 298 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 TUBAL3A6NHL2 446 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 DHRS7CA6NNS2 312 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 A8MU10 97 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 NPIPA7E9PJI5 369 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 PRKYO43930 277 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SNX4O95219 450 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 GNA14O95837 355 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 OPN1MWP04001 364 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 RBMY1CP0DJD4 496 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 NPIPA8P0DM63 369 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 OPN1MW2P0DN77 364 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 OPN1MW3P0DN78 364 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 AZU1P20160 251 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 HOXD10P28358 340 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 GCAP28676 217 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 CD80P33681 288 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 GCKP35557 465 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 LEPP41159 167 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 GRIA1P42261 906 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 MAGEA8P43361 318 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 PRKXP51817 358 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 BIDP55957 195 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 RPS14P62263 151 aaKnown RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 PDK3Q15120 406 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 EXOC3L2Q2M3D2 409 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 RABL6Q3YEC7 729 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 DMRTC1Q5HYR2 192 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 LIPNQ5VXI9 398 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 PAMR1Q6UXH9 720 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 VITQ6UXI7 678 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 BAIAP2L2Q6UXY1 529 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 TRPM8Q7Z2W7 1104 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 EFL1Q7Z2Z2 1120 aaKnown RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SLC35F2Q8IXU6 374 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 OR2L13Q8N349 312 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 CADM2Q8N3J6 435 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 DHRSXQ8N5I4 330 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 C15orf54Q8N8G6 183 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 BHLHE23Q8NDY6 225 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 ZPLD1Q8TCW7 415 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 MAIP1Q8WWC4 291 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SIGLEC12Q96PQ1 595 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SLC38A2Q96QD8 506 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 IL4I1Q96RQ9 567 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 ZBTB18Q99592 522 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 MCHR1Q99705 422 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 VCPKMTQ9H867 229 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 POPDC2Q9HBU9 364 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF275Q9NSD4 429 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 HYPKQ9NX55 129 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 HOXC10Q9NYD6 342 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 SENP1Q9P0U3 644 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 EXTL2Q9UBQ6 330 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 UBQLN1Q9UMX0 589 aaKnown RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 NPIPA1Q9UND3 350 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 ERVW-1Q9UQF0 538 aa2.3□□□□□ -2.04
SCFD1-213ENST00000554776 DDX49Q9Y6V7 483 aaKnown RBP2.3□□□□□ -2.04
SCFD1-213ENST00000554776 CLSPNQ9HAW4 1339 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SMIM28A0A1B0GU29 152 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 A0A1W2PNV4 684 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 BTBD17A6NE02 478 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 TAPBPO15533 448 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 OR10H3O60404 316 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 B4GALT2O60909 372 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 ATP5LO75964 103 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 DIRAS1O95057 198 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SERPINA3P01011 423 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 DNAH10OSP0CZ25 163 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 IMPDH1P20839 514 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 FGF9P31371 208 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 UGT1A3P35503 534 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms