RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 ATP13A2Q9NQ11 1180 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 UBQLN4Q9NRR5 601 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 ASB6Q9NWX5 421 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 TXNL4BQ9NX01 149 aaKnown RBP16.51■□□□□ 0.23
MEG3-224ENST00000554639 ERVK13-1Q9NX77 482 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 HAO2Q9NYQ3 351 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 DTX4Q9Y2E6 619 aa16.51■□□□□ 0.23
MEG3-224ENST00000554639 SF3B6Q9Y3B4 125 aaKnown RBP16.51■□□□□ 0.23
MEG3-224ENST00000554639 TRDV1A0A1B0GX56 115 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 PRR23D1E9PI22 279 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 K7ESF4 209 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 HRKO00198 91 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 RGS13O14921 159 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 PRR23D2P0DMB1 279 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 PEPDP12955 493 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CD53P19397 219 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 HOXA6P31267 233 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 RFX3P48380 749 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CDC20Q12834 499 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 POU4F2Q12837 409 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 ELAVL1Q15717 326 aaKnown RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 OAFQ86UD1 273 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CCDC190Q86UF4 302 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 ACBD7Q8N6N7 88 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SENP5Q96HI0 755 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 WDFY2Q96P53 400 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 NDC1Q9BTX1 674 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 IFT27Q9BW83 186 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SP140LQ9H930 580 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SERTAD3Q9UJW9 196 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CARD8Q9Y2G2 431 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 TMEM184BQ9Y519 407 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 A0A087WUJ7 227 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SLC35F4A4IF30 521 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 FRG2CA6NGY1 282 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SDC3O75056 442 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 PNLIPP16233 465 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 ZNF3P17036 446 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 BCKDHBP21953 392 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 TGM1P22735 817 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 RNF144AP50876 292 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 SLC37A1P57057 533 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 OR1D5P58170 312 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 COL9A2Q14055 689 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 ISXQ2M1V0 245 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 ZC3H14Q6PJT7 736 aaKnown RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 PLEKHG7Q6ZR37 379 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 TMEM151BQ8IW70 566 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CADM3Q8N126 398 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 OR13C2Q8NGS9 318 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 PTPMT1Q8WUK0 201 aaPredicted RBP16.5■□□□□ 0.23
MEG3-224ENST00000554639 CHAC2Q8WUX2 184 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 TM9SF4Q92544 642 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 SLC25A46Q96AG3 418 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 ZNF649Q9BS31 505 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 CCDC32Q9BV29 185 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 KLHL21Q9UJP4 597 aa16.5■□□□□ 0.23
MEG3-224ENST00000554639 TP53BP1Q12888 1972 aaPredicted RBP16.49■□□□□ 0.23
MEG3-224ENST00000554639 HLA-DPB1P04440 258 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 PNMTP11086 282 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 RPS19P39019 145 aaKnown RBP16.49■□□□□ 0.23
MEG3-224ENST00000554639 ARRB1P49407 418 aaPredicted RBP16.49■□□□□ 0.23
MEG3-224ENST00000554639 SQSTM1Q13501 440 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 OR2G6Q5TZ20 316 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 NKAIN2Q5VXU1 208 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 PLBD1Q6P4A8 553 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 TTLL10Q6ZVT0 673 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 NUP54Q7Z3B4 507 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 GATAD2BQ8WXI9 593 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 SGTBQ96EQ0 304 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 SECISBP2Q96T21 854 aaKnown RBP16.49■□□□□ 0.23
MEG3-224ENST00000554639 SYNDIG1Q9H7V2 258 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 SMURF1Q9HCE7 757 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 TRAPPC4Q9Y296 219 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 XIRP2A4UGR9 3374 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 NUP210LQ5VU65 1888 aa16.49■□□□□ 0.23
MEG3-224ENST00000554639 NDUFB2O95178 105 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 SLC2A10O95528 541 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 IFITM3Q01628 133 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 FNDC7Q5VTL7 733 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 KIRREL2Q6UWL6 708 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 C11orf74Q86VG3 221 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 SLC35F3Q8IY50 421 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 CACTIN-AS1Q8N1I8 211 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 PARP16Q8N5Y8 322 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 OR4F15Q8NGB8 312 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 OR14A16Q8NHC5 309 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 AP3S1Q92572 193 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 C12orf10Q9HB07 376 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 CPNE5Q9HCH3 593 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 ZNF304Q9HCX3 659 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 POLHQ9Y253 713 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 CLCA3PQ9Y6N3 262 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 COL5A1P20908 1838 aaPredicted RBP16.48■□□□□ 0.23
MEG3-224ENST00000554639 TCRBV16S1A1N1A0A5B0 115 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 SOCS6O14544 535 aa16.48■□□□□ 0.23
MEG3-224ENST00000554639 IDH3BO43837 385 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms