RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 C1GALT1C1LP0DN25 315 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 GNAZP19086 355 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CERS1P27544 350 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 PTPN6P29350 595 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ACVR1BP36896 505 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CASP3P42574 277 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 FBXW4P57775 412 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 BASP1P80723 227 aaKnown RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ID2Q02363 134 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 FUT7Q11130 342 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 FGFBP1Q14512 234 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 IL13RA2Q14627 380 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ADPRMQ3LIE5 342 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ADAM5Q6NVV9 412 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SLC22A25Q6T423 547 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF813Q6ZN06 617 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 DNM1P46Q6ZS02 220 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CHMP1BQ7LBR1 199 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF550Q7Z398 422 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 P4HA3Q7Z4N8 544 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 TMPRSS11BQ86T26 416 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 KLBQ86Z14 1044 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 OR4N5Q8IXE1 308 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 GCNT2Q8N0V5 402 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CNEP1R1Q8N9A8 125 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 LRRC57Q8N9N7 239 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 FAM83FQ8NEG4 500 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 OR1J4Q8NGS1 313 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 RFWD2Q8NHY2 731 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 C1orf54Q8WWF1 131 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 PPWD1Q96BP3 646 aaKnown RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 LINGO1Q96FE5 620 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 TSNARE1Q96NA8 513 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CSF3RQ99062 836 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 RHNO1Q9BSD3 238 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 TBCDQ9BTW9 1192 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CAPS2Q9BXY5 557 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 PLA2G12AQ9BZM1 189 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SHARPINQ9H0F6 387 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SLCO5A1Q9H2Y9 848 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 COPS7BQ9H9Q2 264 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CLCF1Q9UBD9 225 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 UPB1Q9UBR1 384 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 FBXO5Q9UKT4 447 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 DLGAP4Q9Y2H0 992 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ZCWPW2A0A1B0GU75 182 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 PLOD2O00469 737 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 EMC8O43402 210 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 HCRTR2O43614 444 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 FGF17O60258 216 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 GPRIN2O60269 458 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 SIX3O95343 332 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 GUCA1CO95843 209 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TBX6O95947 436 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CGAP01215 116 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 F7P08709 466 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 NAGAP17050 411 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TPSB2P20231 275 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CPN2P22792 545 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ATP5A1P25705 553 aaKnown RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 SLC1A2P43004 574 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 STARP49675 285 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TMED10P49755 219 aaKnown RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 LHX2P50458 406 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ZNF75DP51815 510 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CDH15P55291 814 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 SNX1Q13596 522 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 EBPQ15125 230 aaKnown RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TPSAB1Q15661 275 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 BCL2A1Q16548 175 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CCNG2Q16589 344 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 KBTBD12Q3ZCT8 623 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 FAM69AQ5T7M9 428 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 CYB5R2Q6BCY4 276 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 SLC30A6Q6NXT4 461 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 AAGABQ6PD74 315 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 BHLHB9Q6PI77 547 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ANGPTL8Q6UXH0 198 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TMEM64Q6YI46 380 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 NUP54Q7Z3B4 507 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ARMC8Q8IUR7 673 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-228ENST00000554592 TMEM217Q8N7C4 229 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 ACOT4Q8N9L9 421 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 BBOF1Q8ND07 529 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 SETD9Q8NE22 299 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 OR14L1PQ8NHC6 308 aa4.33□□□□□ -1.72
ATXN3-228ENST00000554592 OSR1Q8TAX0 266 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms