RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CPED1A4D0V7 1026 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ATP6V1G2-DDX39BF2Z307 99 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 CDC42EP2O14613 210 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 TNFSF8P32971 234 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 TGM4P49221 684 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 ST3GAL3Q11203 375 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SNAPC1Q16533 368 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 NPSR1Q6W5P4 371 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 SHFQ7M4L6 423 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 YIPF7Q8N8F6 280 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 GATSQ8NAP1 163 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 RCBTB1Q8NDN9 531 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 MAFAQ8NHW3 353 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 OTULINQ96BN8 352 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 CCDC59Q9P031 241 aaKnown RBP10.8□□□□□ -0.68
SHMT2-212ENST00000554467 PCDHGB2Q9Y5G2 931 aa10.8□□□□□ -0.68
SHMT2-212ENST00000554467 WWP2O00308 870 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 GMFGO60234 142 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 OR7A10O76100 309 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 NSA2O95478 260 aaKnown RBP10.79□□□□□ -0.68
SHMT2-212ENST00000554467 GIMD1P0DJR0 217 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 GIPRP48546 466 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 TNK1Q13470 666 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 OGFOD3Q6PK18 319 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 TMPRSS9Q7Z410 1059 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 OR1L3Q8NH93 324 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 DNASE2BQ8WZ79 361 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 TMEM80Q96HE8 168 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 DUSP22Q9NRW4 184 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 C20orf141Q9NUB4 165 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 V9GYH0 126 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 HEATR5AQ86XA9 2040 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 KIAA0513O60268 411 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 CTNSO60931 367 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 AGR2O95994 175 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 PRKACAP17612 351 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 STK11Q15831 433 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 VWA2Q5GFL6 755 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 LIX1LQ8IVB5 337 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 GALNT6Q8NCL4 622 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 C16orf52Q8NHV5 167 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 LRR1Q96L50 414 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 CUTCQ9NTM9 273 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 ENOPH1Q9UHY7 261 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 MRPS33Q9Y291 106 aaKnown RBP10.79□□□□□ -0.68
SHMT2-212ENST00000554467 PEX16Q9Y5Y5 336 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 FER1L5A0AVI2 2057 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 ALPK2Q86TB3 2170 aa10.79□□□□□ -0.68
SHMT2-212ENST00000554467 CLDN4O14493 209 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 BRINP1O60477 761 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SLC2A10O95528 541 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TRAPPC2P0DI81 140 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TRAPPC2BP0DI82 140 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 NID1P14543 1247 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 EFNA3P52797 238 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SHBQ15464 509 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TAB1Q15750 504 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TMEM65Q6PI78 240 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SLC36A4Q6YBV0 504 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 PIGXQ8TBF5 258 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 MGLLQ99685 303 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 MESP1Q9BRJ9 268 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 DPH1Q9BZG8 443 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-212ENST00000554467 GLTPQ9NZD2 209 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 NUP50Q9UKX7 468 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TRAPPC4Q9Y296 219 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 OR10H1Q9Y4A9 318 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TEX51A0A1B0GUA7 166 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 CIB4A0PJX0 185 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 CDHR4A6H8M9 788 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 OMPP47874 163 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 OR1Q1Q15612 314 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 C12orf73Q69YU5 71 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 B3GLCTQ6Y288 498 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 NECAB3Q96P71 396 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SLC30A2Q9BRI3 323 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 CCDC32Q9BV29 185 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 PLCXD1Q9NUJ7 323 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 FLRT3Q9NZU0 649 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 CDC14CA4D256 554 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 PDGFAP04085 211 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 DBIP07108 87 aaKnown RBP10.78□□□□□ -0.68
SHMT2-212ENST00000554467 ATF4P18848 351 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-212ENST00000554467 RGS6P49758 472 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 GZMKP49863 264 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF91Q05481 1191 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 MFSD13AQ14CX5 517 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SMARCD3Q6STE5 483 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 ASB15Q8WXK1 588 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 RELTQ969Z4 430 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 VSTM2LQ96N03 204 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms