RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ACTR3BQ9P1U1 418 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 C15orf41Q9Y2V0 281 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 NPFFR2Q9Y5X5 522 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 DNHD1Q96M86 4753 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 ABCA2Q9BZC7 2435 aa12.68□□□□□ -0.38
SPTLC2-202ENST00000554365 MBD3L4A6NDZ8 208 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 MBD3L3A6NE82 208 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 MBD3L5A6NJ08 208 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 GNB5O14775 395 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 ACOX3O15254 700 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 TSPAN2O60636 221 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 AK1P00568 194 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 GUSBP08236 651 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 INHBBP09529 407 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 NR2F1P10589 423 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 BMP7P18075 431 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 HOXC12P31275 282 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 OPRM1P35372 400 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 TMED10P49755 219 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 NRG3P56975 720 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 RPP38P78345 283 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 CHRNEQ04844 493 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 GPAT3Q53EU6 434 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 GLYATQ6IB77 296 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 LCN8Q6JVE9 175 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 MBD3L2Q8NHZ7 208 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 FIG4Q92562 907 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 ABTB1Q969K4 478 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 TMBIM1Q969X1 311 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 WDYHV1Q96HA8 205 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 RAB3IPQ96QF0 476 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 UBQLN3Q9H347 655 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 GORASP2Q9H8Y8 452 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 MAGEL2Q9UJ55 1249 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 ANGPT4Q9Y264 503 aa12.67□□□□□ -0.38
SPTLC2-202ENST00000554365 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 TCRBV5S2A0A599 114 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 KIAA0513O60268 411 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 IL33O95760 270 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 TMIGD3P0DMS9 266 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 ABCD3P28288 659 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 AQP1P29972 269 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 KDELR2P33947 212 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 CASP3P42574 277 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 CRISP3P54108 245 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 CCNIQ14094 377 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 NHSL2Q5HYW2 709 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 DESI1Q6ICB0 168 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 CLEC9AQ6UXN8 241 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 LUZP2Q86TE4 346 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 OR52E4Q8NGH9 312 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 TAMM41Q96BW9 452 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 ZG16BQ96DA0 208 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 OMA1Q96E52 524 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 SECISBP2Q96T21 854 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 POLE3Q9NRF9 147 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 FLRT3Q9NZU0 649 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 OR10H1Q9Y4A9 318 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 GPC6Q9Y625 555 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 NINQ8N4C6 2090 aa12.66□□□□□ -0.38
SPTLC2-202ENST00000554365 KIAA1549Q9HCM3 1950 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 A0A0G2JPF8 293 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 HNRNPCL2B2RXH8 293 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 HNRNPCL3B7ZW38 293 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 C5orf58C9J3I9 102 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 M0QX08 132 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 GSTA4O15217 222 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 STX11O75558 287 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 HRGP04196 525 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 HNRNPCL4P0DMR1 293 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 CYP4B1P13584 511 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 ETS2P15036 469 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 CD53P19397 219 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 PLCXD2Q0VAA5 305 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 FOXF2Q12947 444 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 FLOT2Q14254 428 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 KPNB1Q14974 876 aaKnown RBP12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 MAPK14Q16539 360 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
SPTLC2-202ENST00000554365 HMGN2P46Q86SG4 172 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms