RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 EVI2BP34910 448 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MSX2P35548 267 aaPredicted RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 UGT2B10P36537 528 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MC3RP41968 323 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ALDH3B2P48448 385 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 KRT6CP48668 564 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 SLC7A2P52569 658 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PNLIPRP2P54317 469 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 PSPHP78330 225 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MYBPC1Q00872 1141 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 FGFBP1Q14512 234 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 HEPACAMQ14CZ8 416 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PON3Q15166 354 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 SGCBQ16585 318 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 EXOC3L2Q2M3D2 409 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 KCTD21Q4G0X4 260 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MTX3Q5HYI7 312 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 C6orf52Q5T4I8 152 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 FAM219BQ5XKK7 198 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ZNF474Q6S9Z5 364 aaPredicted RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 NPSR1Q6W5P4 371 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 BTLAQ7Z6A9 289 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 SATL1Q86VE3 508 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 CARM1Q86X55 608 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 DDIASQ8IXT1 998 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 SLC15A3Q8IY34 581 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 RNF148Q8N7C7 305 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 CDYL2Q8N8U2 506 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 OR5M1Q8NGP8 315 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ZFP28Q8NHY6 868 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ZNF675Q8TD23 568 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TWIST2Q8WVJ9 160 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 LRTOMTQ8WZ04 291 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 FIG4Q92562 907 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TFAP2CQ92754 450 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PPP1R14BQ96C90 147 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MARK4Q96L34 752 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ZNF681Q96N22 645 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 BBS4Q96RK4 519 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PRPF18Q99633 342 aaKnown RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 SH3GL1Q99961 368 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 EBPLQ9BY08 206 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ANKRD60Q9BZ19 345 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PRRG4Q9BZD6 226 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PCDHAC1Q9H158 963 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 DSN1Q9H410 356 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PTGES2Q9H7Z7 377 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 SDHAF3Q9NRP4 125 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 ELOVL5Q9NYP7 299 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TAS2R9Q9NYW1 312 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 MED11Q9P086 117 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TRPS1Q9UHF7 1281 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 FIS1Q9Y3D6 152 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 GPR45Q9Y5Y3 372 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 RNF103-CHMP3A0A140T963 221 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 C7orf72A4D263 438 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CCDC160A6NGH7 325 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 C17orf51A8MQB3 221 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 INAFM1C9JVW0 142 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 H0YC42 278 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 MANBAO00462 879 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 PPP6CO00743 305 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 AKAP10O43572 662 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 ZIC3O60481 467 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 ULK1O75385 1050 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CT45A8P0DMV1 189 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CT45A9P0DMV2 189 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 FCGR2AP12318 317 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 HSD3B1P14060 373 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 MYF6P23409 242 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 SLC6A2P23975 617 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 HSD3B2P26439 372 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CCKARP32238 428 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 MPIP34949 423 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 KIR2DL2P43627 348 aaPredicted RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 NCBP2P52298 156 aaKnown RBP eCLIP7.95□□□□□ -1.14
TDP1-208ENST00000553989 TPD52P55327 224 aaPredicted RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 EMX2Q04743 252 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 ACSM2AQ08AH3 577 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CSTF3Q12996 717 aaKnown RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 MAD2L1Q13257 205 aaPredicted RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 GANABQ14697 944 aaKnown RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 ZNHIT3Q15649 155 aaPredicted RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 BCL2A1Q16548 175 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 ZBED5Q49AG3 693 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 VPS26BQ4G0F5 336 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 SPIN4Q56A73 249 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 CT45A2Q5DJT8 189 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 ACSM2BQ68CK6 577 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 PRSS57Q6UWY2 283 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 RNF165Q6ZSG1 346 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 PRIMA1Q86XR5 153 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 DPP10Q8N608 796 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 OR4N2Q8NGD1 307 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 FNDC9Q8TBE3 224 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 PNPT1Q8TCS8 783 aaKnown RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 SLCO4A1Q96BD0 722 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms