RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 DCTN4Q9UJW0 460 aa7.88□□□□□ -1.15
PRKCH-208ENST00000553846 TMCO1Q9UM00 188 aa7.88□□□□□ -1.15
PRKCH-208ENST00000553846 PCDHGB1Q9Y5G3 927 aa7.88□□□□□ -1.15
PRKCH-208ENST00000553846 IGHV1-18A0A0C4DH31 117 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 AVPP01185 164 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 PRPS2P11908 318 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 DAOP14920 347 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 STX2P32856 288 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 SERPINF1P36955 418 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 ASMTP46597 345 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 DIO1P49895 249 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 SERPINB8P50452 374 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 IDH3GP51553 393 aaPredicted RBP7.87□□□□□ -1.15
PRKCH-208ENST00000553846 P2RX1P51575 399 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 MRPS25P82663 173 aaKnown RBP7.87□□□□□ -1.15
PRKCH-208ENST00000553846 C2orf80Q0P641 193 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 CARTPTQ16568 116 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 OCLNQ16625 522 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 MIDNQ504T8 468 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 ZNF385BQ569K4 471 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 CCNJQ5T5M9 372 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 HIST2H2BDQ6DRA6 164 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 SLC46A3Q7Z3Q1 461 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 ZNF100Q8IYN0 542 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 ZDHHC22Q8N966 263 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 FBXO30Q8TB52 745 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 APH1AQ96BI3 265 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 C16orf58Q96GQ5 468 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 MS4A4EQ96PG1 132 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 CARD8Q9Y2G2 431 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 AMDHD2Q9Y303 409 aa7.87□□□□□ -1.15
PRKCH-208ENST00000553846 WNK2Q9Y3S1 2297 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 TMEM129A0AVI4 362 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CIB4A0PJX0 185 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 B4DSR2 109 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 B9A039 149 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SCDO00767 359 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 KRT6AP02538 564 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 KRT6BP04259 564 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 RBP1P09455 135 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 OR4A8P0C604 315 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 PCMT1P22061 227 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SLC7A1P30825 629 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 NTSP30990 170 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 LIMS1P48059 325 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 KRT6CP48668 564 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 H3F3AP84243 136 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CLCQ05315 142 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SKP2Q13309 424 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CCNIQ14094 377 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 QPRTQ15274 297 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 RASA2Q15283 850 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 VPS26BQ4G0F5 336 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 UNC50Q53HI1 259 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 C3orf33Q6P1S2 294 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 ZDHHC24Q6UX98 284 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 TMPPEQ6ZT21 453 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 IKBIPQ70UQ0 350 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 MTDHQ86UE4 582 aaKnown RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 LSRQ86X29 649 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 ZCCHC24Q8N2G6 241 aaKnown RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SVOPLQ8N434 492 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 ATP6V1C2Q8NEY4 427 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CIDECQ96AQ7 238 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 TMEM186Q96B77 213 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 OTUB1Q96FW1 271 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 EGLN2Q96KS0 407 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 KCNA7Q96RP8 456 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 DOK1Q99704 481 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 QRSL1Q9H0R6 528 aaKnown RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SEC61A2Q9H9S3 476 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 G6PC2Q9NQR9 355 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 DUSP22Q9NRW4 184 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SLC7A10Q9NS82 523 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 SIRT3Q9NTG7 399 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 HIF1ANQ9NWT6 349 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 EMC3Q9P0I2 261 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CRNNQ9UBG3 495 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 PCDHB10Q9UN67 800 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 WBP11Q9Y2W2 641 aaKnown RBP7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CCL27Q9Y4X3 112 aa7.86□□□□□ -1.15
PRKCH-208ENST00000553846 CCT8L1PA6NM43 557 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 WNT9BO14905 357 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 TBX19O60806 448 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 ULK1O75385 1050 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 FSHBP01225 129 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 IGLV1-44P01699 117 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 ARAFP10398 606 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 TCP1P17987 556 aaKnown RBP7.85□□□□□ -1.15
PRKCH-208ENST00000553846 EPHA1P21709 976 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 CALCRP30988 508 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 FOXA1P55317 472 aa7.85□□□□□ -1.15
PRKCH-208ENST00000553846 POU3F1Q03052 451 aaPredicted RBP7.85□□□□□ -1.15
PRKCH-208ENST00000553846 HGFACQ04756 655 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms