RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LAMA2P24043 3122 aaKnown RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 PRDX6P30041 224 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 NLRP11P59045 1033 aaKnown RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 PSG7Q13046 419 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 LRIT3Q3SXY7 679 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 TMEM41BQ5BJD5 291 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CFAP157Q5JU67 520 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 SEL1L2Q5TEA6 688 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 LRRC8BQ6P9F7 803 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ZCCHC12Q6PEW1 402 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 C1orf186Q6ZWK4 172 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 COPS6Q7L5N1 327 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 GPR142Q7Z601 462 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 GPBP1Q86WP2 473 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CEND1Q8N111 149 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CERS5Q8N5B7 392 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 Q8N9L7 120 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 GMCL1P1Q8NEA9 526 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 RDH11Q8TC12 318 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 SH3TC1Q8TE82 1336 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 PRUNE2Q8WUY3 3088 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 OPTNQ96CV9 577 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 TTC25Q96NG3 672 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CBWD1Q9BRT8 395 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 C19orf24Q9BVV8 132 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 GSDMCQ9BYG8 508 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ECT2Q9H8V3 914 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 COG4Q9H9E3 785 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ADGRL4Q9HBW9 690 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 PALMDQ9NP74 551 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CNOT2Q9NZN8 540 aaKnown RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 C6orf203Q9P0P8 240 aaPredicted RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 COX16Q9P0S2 106 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ATP6V1HQ9UI12 483 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 RABL2BQ9UNT1 228 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CA5BQ9Y2D0 317 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 FKBP7Q9Y680 259 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ANKRD36CQ5JPF3 1778 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CCL15-CCL14A0A0B4J2E2 113 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 A0A0U1RRA0 63 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 PANO1I0J062 215 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 ARPC1BO15143 372 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 MAGEB3O15480 346 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 EMC8O43402 210 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CPNE6O95741 557 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 EIF2S2P20042 333 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 IGFBP5P24593 272 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 SOX6P35712 828 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CCL11P51671 97 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 PRMT2P55345 433 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 SRYQ05066 204 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 ELP6Q0PNE2 266 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 EXOSC7Q15024 291 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 CCL15Q16663 113 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 SHROOM1Q2M3G4 852 aaPredicted RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 USH1GQ495M9 461 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 SLC36A3Q495N2 470 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 EPC2Q52LR7 807 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 SLC25A24Q6NUK1 477 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 BLOC1S2Q6QNY1 142 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CASC1Q6TDU7 716 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 FAM159AQ6UWV7 190 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 TFAP2EQ6VUC0 442 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 GOLGA7Q7Z5G4 137 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 YRDCQ86U90 279 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 CENPSQ8N2Z9 138 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CADM2Q8N3J6 435 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 BCORP1Q8N888 145 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 OR52B4Q8NGK2 314 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 OR4L1Q8NH43 312 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 CCDC26Q8TAB7 109 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 RAET1EQ8TD07 263 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 DQX1Q8TE96 717 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 TMEM37Q8WXS4 190 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 NCLNQ969V3 563 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 RAB7BQ96AH8 199 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 DEFB118Q96PH6 123 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 GPA33Q99795 319 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 WRAP53Q9BUR4 548 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 NMUR2Q9GZQ4 415 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 ELOVL4Q9GZR5 314 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 FAM124BQ9H5Z6 455 aaPredicted RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 WDR76Q9H967 626 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 MIEF1Q9NQG6 463 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 GDAP2Q9NXN4 497 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 RDH8Q9NYR8 311 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 IL20RAQ9UHF4 553 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 XPO7Q9UIA9 1087 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 EMCNQ9ULC0 261 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 RRP15Q9Y3B9 282 aaKnown RBP2.54□□□□□ -2
SCFD1-210ENST00000553693 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 LAMB4A4D0S4 1761 aa2.54□□□□□ -2
SCFD1-210ENST00000553693 A0A0A6YYD4 124 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 SH3PXD2BA1X283 911 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 TMEM89A2RUT3 159 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 TRIM64CA6NLI5 447 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 G3V3Y1 287 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 BUB1O43683 1085 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 CSF2P04141 144 aa2.53□□□□□ -2
SCFD1-210ENST00000553693 CA3P07451 260 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms