RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 LRRTM2O43300 516 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 FRS3O43559 492 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 TPST1O60507 370 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 AGFG2O95081 481 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF708P17019 499 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 KDELR2P33947 212 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RPS3AP61247 264 aaKnown RBP12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RAC1P63000 192 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 SPATS1Q496A3 300 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM211Q6ICI0 200 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 C3orf33Q6P1S2 294 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 POMZP3Q6PJE2 187 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 PLEKHM3Q6ZWE6 761 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RANBP3LQ86VV4 465 aaPredicted RBP12.5□□□□□ -0.41
TUBB3-202ENST00000553656 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
TUBB3-202ENST00000553656 ATP6V1C2Q8NEY4 427 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 POC1BQ8TC44 478 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RELTQ969Z4 430 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 FAM162AQ96A26 154 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 ADPRHL2Q9NX46 363 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 RPS6KB2Q9UBS0 482 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 SLC9A8Q9Y2E8 581 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 MEMO1Q9Y316 297 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 CHST2Q9Y4C5 530 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 FREM3P0C091 2139 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
TUBB3-202ENST00000553656 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
TUBB3-202ENST00000553656 EIF1AYO14602 144 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 GCM2O75603 506 aaPredicted RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 C8BP07358 591 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 TCN1P20061 433 aaPredicted RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 PSMA4P25789 261 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 HTR1EP28566 365 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SLC7A1P30825 629 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SFTPDP35247 375 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SLC1A3P43003 542 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 KCNJ5P48544 419 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 CLDN18P56856 261 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SGCBQ16585 318 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 CYBRD1Q53TN4 286 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 EMC4Q5J8M3 183 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 B3GNT6Q6ZMB0 384 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 LILRA2Q8N149 483 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 ARHGAP24Q8N264 748 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 OR52E4Q8NGH9 312 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SLC25A43Q8WUT9 341 aaPredicted RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 TPD52L3Q96J77 140 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 KLHL15Q96M94 604 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 NPAS1Q99742 590 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SELENONQ9NZV5 590 aa12.49□□□□□ -0.41
TUBB3-202ENST00000553656 GMPR2Q9P2T1 348 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 TESQ9UGI8 421 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 SPENQ96T58 3664 aaKnown RBP12.49□□□□□ -0.41
TUBB3-202ENST00000553656 ETV2O00321 342 aaPredicted RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ADAM11O75078 769 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 NTN1O95631 604 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 LGI1O95970 557 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 FESP07332 822 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 T-ENOLP0DO92 83 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TFPIP10646 304 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 PRG2P13727 222 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 HSD17B1P14061 328 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 GGT1P19440 569 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 FKBP2P26885 142 aaKnown RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TACR3P29371 465 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 CPOXP36551 454 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ACAA2P42765 397 aaKnown RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 CLDN20P56880 219 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 CBX1P83916 185 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 DUSP7Q16829 419 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ACSF3Q4G176 576 aaPredicted RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 DNAL1Q4LDG9 190 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ESPNLQ6ZVH7 1005 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 FAM26EQ8N5C1 309 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 VANGL1Q8TAA9 524 aaPredicted RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ZPLD1Q8TCW7 415 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 PHF10Q8WUB8 498 aaKnown RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TRIB1Q96RU8 372 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ARHGDIGQ99819 225 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TUBA1CQ9BQE3 449 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF559Q9BR84 538 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TRIM2Q9C040 744 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 C1orf21Q9H246 121 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms