RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CALB2P22676 271 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 PRKAR2BP31323 418 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 UGT1A3P35503 534 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 LEPP41159 167 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 KIAA0040Q15053 153 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 AANATQ16613 207 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 MAJINQ3KP22 176 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 LRRC23Q53EV4 343 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-210ENST00000553455 FRA10AC1Q70Z53 315 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 CCDC80Q76M96 950 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 UBQLNLQ8IYU4 475 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 ZPLD1Q8TCW7 415 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 SECISBP2Q96T21 854 aaKnown RBP3.76□□□□□ -1.81
SYNE2-210ENST00000553455 SLC35A5Q9BS91 424 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 NAT10Q9H0A0 1025 aaKnown RBP3.76□□□□□ -1.81
SYNE2-210ENST00000553455 VCX2Q9H322 139 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 LRRN3Q9H3W5 708 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 FANCFQ9NPI8 374 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 TMEM9Q9P0T7 183 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 ONECUT1Q9UBC0 465 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 TIMM10BQ9Y5J6 103 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 LRRK1Q38SD2 2015 aa3.76□□□□□ -1.81
SYNE2-210ENST00000553455 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 SMIM28A0A1B0GU29 152 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 KIF2AO00139 706 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-210ENST00000553455 SERF1AO75920 110 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 EPHX2P34913 555 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 RIPPLY3P57055 190 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 RPS14P62263 151 aaKnown RBP3.75□□□□□ -1.81
SYNE2-210ENST00000553455 IGLV3-21P80748 117 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-210ENST00000553455 EGFEM1PQ0D2K5 195 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 EXOC3L2Q2M3D2 409 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF658Q5TYW1 1059 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-210ENST00000553455 TPGS2Q68CL5 300 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 PMF1Q6P1K2 205 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 MOB1BQ7L9L4 216 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 NLRP9Q7RTR0 991 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 TRPM8Q7Z2W7 1104 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 OR2L13Q8N349 312 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 SVOPLQ8N434 492 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 FBXL16Q8N461 479 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 MS4A14Q96JA4 679 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 IL4I1Q96RQ9 567 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 TUBGCP2Q9BSJ2 902 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 SLITRK2Q9H156 845 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 C6orf203Q9P0P8 240 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-210ENST00000553455 CLEC4EQ9ULY5 219 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 CLEC4AQ9UMR7 237 aa3.75□□□□□ -1.81
SYNE2-210ENST00000553455 TRAV26-1A0A087WT03 109 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 N4BP1O75113 896 aaKnown RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 SURF6O75683 361 aaKnown RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 IL1BP01584 269 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 SEMG1P04279 462 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 POLR2EP19388 210 aaKnown RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 IMPDH1P20839 514 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 BCL2L1Q07817 233 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 LRRC36Q1X8D7 754 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 CEP55Q53EZ4 464 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 BEND3Q5T5X7 828 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 ZSCAN25Q6NSZ9 544 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 Q6ZPB1 254 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 C11orf42Q8N5U0 333 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 OR5D13Q8NGL4 314 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 FGGYQ96C11 551 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 SERAC1Q96JX3 654 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 TBX15Q96SF7 602 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF184Q99676 751 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-210ENST00000553455 NPAS2Q99743 824 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 TMEM43Q9BTV4 400 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 SRXN1Q9BYN0 137 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 VCPKMTQ9H867 229 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 NUDT15Q9NV35 164 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 SMAD5-AS1Q9Y6J3 95 aa3.74□□□□□ -1.81
SYNE2-210ENST00000553455 TUBAL3A6NHL2 446 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 CYSRT1A8MQ03 144 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 K7N7A8 449 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 CXCL13O43927 109 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 HCN1O60741 890 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 LYPLA1O75608 230 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-210ENST00000553455 OR8U8P0C7N1 319 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 AQP1P29972 269 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 FGF9P31371 208 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-210ENST00000553455 GRIA1P42261 906 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 EFNB2P52799 333 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 RIPK4P57078 832 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 TRIM16LQ309B1 348 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 PRR30Q53SZ7 412 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-210ENST00000553455 CEND1Q8N111 149 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 ATP6V0D2Q8N8Y2 350 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 EIF1ADQ8N9N8 165 aaKnown RBP3.73□□□□□ -1.81
SYNE2-210ENST00000553455 OR8J1Q8NGP2 316 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 OR56B4Q8NH76 319 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 MTMR9Q96QG7 549 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 CCT7Q99832 543 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 KLHDC3Q9BQ90 382 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 GON7Q9BXV9 100 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 CAPS2Q9BXY5 557 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms