RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C1QCP02747 245 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 OPN1LWP04000 364 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 NID1P14543 1247 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 SLC7A1P30825 629 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 SFTPDP35247 375 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 KIR2DL2P43627 348 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-204ENST00000553324 HTR3AP46098 478 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 SESN3P58005 492 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 PRAMEF8Q5VWM4 474 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 PRAMEF7Q5VXH5 474 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 PPP4R4Q6NUP7 873 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 C3orf33Q6P1S2 294 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 FAM214BQ7L5A3 538 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 LUZP2Q86TE4 346 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 ZNF440Q8IYI8 595 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 FAM222BQ8WU58 562 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 SLC38A5Q8WUX1 472 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 WDR60Q8WVS4 1066 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 STARD4Q96DR4 205 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 IFT52Q9Y366 437 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 EMC9Q9Y3B6 208 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
SHMT2-204ENST00000553324 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 EFNA2O43921 213 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 SMNDC1O75940 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 CD8BP10966 210 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 BMP2P12643 396 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 IL11P20809 199 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 RPS4Y1P22090 263 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 CLK1P49759 484 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 MAP2K6P52564 334 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 CTBP2P56545 445 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 RAC3P60763 192 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 MERTKQ12866 999 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 RNPS1Q15287 305 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 GTDC1Q4AE62 458 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 LIN52Q52LA3 116 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 GRINAQ7Z429 371 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 SLC43A2Q8N370 569 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 OR52P1PQ8NH57 321 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 SLC25A43Q8WUT9 341 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 THOC1Q96FV9 657 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 GP6Q9HCN6 339 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 FANCFQ9NPI8 374 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 SLC52A3Q9NQ40 469 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 ELOVL5Q9NYP7 299 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 LEF1Q9UJU2 399 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-204ENST00000553324 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
SHMT2-204ENST00000553324 CFAP73A6NFT4 308 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 C5orf58C9J3I9 102 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 FAAHO00519 579 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 AQP8O94778 261 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 BCHEP06276 602 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 THBS1P07996 1170 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
SHMT2-204ENST00000553324 EPXP11678 715 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 RYKP34925 604 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 GUSBP1Q15486 140 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 PAGE3Q5JUK9 113 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 PLEKHM3Q6ZWE6 761 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 BTLAQ7Z6A9 289 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 ATP6V1C2Q8NEY4 427 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 OR6K3Q8NGY3 331 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 TMEM19Q96HH6 336 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 LURAP1Q96LR2 239 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 CCDC134Q9H6E4 229 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 BCL2L10Q9HD36 194 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 PLSCR4Q9NRQ2 329 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
SHMT2-204ENST00000553324 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 DSPPQ9NZW4 1301 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 CLDN24A6NM45 220 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 ANGPT2O15123 496 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 SS18L1O75177 396 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 PRKD3O94806 890 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 GOSR1O95249 250 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 HOXB9P17482 250 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 IDH2P48735 452 aaKnown RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 ARFIP2P53365 341 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 CSNK2A1P68400 391 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 SIRPAP78324 504 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 DAZAP2Q15038 168 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 MAPK11Q15759 364 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 ZNF239Q16600 458 aaKnown RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 MRPL2Q5T653 305 aaKnown RBP13.73□□□□□ -0.21
SHMT2-204ENST00000553324 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 ZNF550Q7Z398 422 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 STK32CQ86UX6 486 aa13.73□□□□□ -0.21
SHMT2-204ENST00000553324 CNOT9Q92600 299 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms