RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 GGNQ86UU5 652 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 VRK2Q86Y07 508 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 KRT73Q86Y46 540 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 PCYOX1LQ8NBM8 494 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ATP6V1C2Q8NEY4 427 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 OR2V1Q8NHB1 315 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF845Q96IR2 970 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 IKZF5Q9H5V7 419 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 BCL2L10Q9HD36 194 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ACER3Q9NUN7 267 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 DNAJB12Q9NXW2 375 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF629Q9UEG4 869 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 MCTS1Q9ULC4 181 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ANGPT4Q9Y264 503 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 KIAA1549Q9HCM3 1950 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 NBPF19A0A087WUL8 3843 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 TNFSF11O14788 317 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 BCAS1O75363 584 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 RCBTB2O95199 551 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 PGM3O95394 542 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 COX6B1P14854 86 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC6A2P23975 617 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 GYS2P54840 703 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 MTPNP58546 118 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SCARB2Q14108 478 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 CAPRIN1Q14444 709 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC25A53Q5H9E4 307 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 REP15Q6BDI9 236 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 REEP3Q6NUK4 255 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 C3orf33Q6P1S2 294 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 POMZP3Q6PJE2 187 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 PLXDC2Q6UX71 529 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 GCNT2Q8N0V5 402 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 C11orf65Q8NCR3 313 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 OR10D3Q8NH80 312 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 FIG4Q92562 907 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 INTS12Q96CB8 462 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SH3GL1Q99961 368 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SPATA5L1Q9BVQ7 753 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SFXN3Q9BWM7 321 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 TMEM38AQ9H6F2 299 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 TIGARQ9NQ88 270 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 ARMCX1Q9P291 453 aa16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 SPIN1Q9Y657 262 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 INTS1Q8N201 2190 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-216ENST00000552301 NAV2Q8IVL1 2488 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 LOC100653049A0A140TA62 436 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 GMNCA6NCL1 334 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 CFAP73A6NFT4 308 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 EEF1E1-BLOC1S5C9J1V9 151 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 FBP2O00757 339 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 EEF1E1O43324 174 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 HNRNPRO43390 633 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 DNAJA2O60884 412 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 KRT34O76011 436 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 NTN1O95631 604 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 TGM6O95932 706 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 IL18BPO95998 194 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 ETS2P15036 469 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 IL11P20809 199 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 EEF1A1P68104 462 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 TMEM176BQ3YBM2 270 aaPredicted RBP16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF311Q5JNZ3 666 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 RNF220Q5VTB9 566 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 GRINAQ7Z429 371 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 LIX1LQ8IVB5 337 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 FNDC9Q8TBE3 224 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 REXO5Q96IC2 774 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 SPATA9Q9BWV2 254 aa16.61■□□□□ 0.25
PRPF40B-216ENST00000552301 MED12LQ86YW9 2145 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 A0A0J9YW62 118 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 CDHR4A6H8M9 788 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ETV2O00321 342 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ADAMDEC1O15204 470 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 CXCL13O43927 109 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 PABPC4LP0CB38 370 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 HTR3AP46098 478 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 IDH2P48735 452 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ASCL1P50553 236 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 COPZ1P61923 177 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 RBBP4Q09028 425 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF787Q6DD87 383 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 PLEKHM3Q6ZWE6 761 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF550Q7Z398 422 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 C10orf111Q8N326 155 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 RELL2Q8NC24 303 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 HIPK4Q8NE63 616 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ADGRG7Q96K78 797 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF607Q96SK3 696 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 RLIMQ9NVW2 624 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 GID8Q9NWU2 228 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
PRPF40B-216ENST00000552301 PKDREJQ9NTG1 2253 aa16.59■□□□□ 0.25
PRPF40B-216ENST00000552301 C19orf84I3L1E1 186 aa16.59■□□□□ 0.25
PRPF40B-216ENST00000552301 AP3D1O14617 1153 aa16.59■□□□□ 0.25
PRPF40B-216ENST00000552301 SERPINB7O75635 380 aa16.59■□□□□ 0.25
PRPF40B-216ENST00000552301 PLGP00747 810 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms