RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PEX5LQ8IYB4 626 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 FAM222BQ8WU58 562 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 WDR60Q8WVS4 1066 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 CPNE4Q96A23 557 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 ZG16BQ96DA0 208 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 MTHFD2LQ9H903 347 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 CRIM1Q9NZV1 1036 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 EMC9Q9Y3B6 208 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 PCDHB14Q9Y5E9 798 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 SPG11Q96JI7 2443 aa15.45■□□□□ 0.06
CHMP1A-208ENST00000550102 DSPPQ9NZW4 1301 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 UQCRHLA0A096LP55 91 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 TUBAL3A6NHL2 446 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 CLDN24A6NM45 220 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 ENO4A6NNW6 628 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 BCAS1O75363 584 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 DBIP07108 87 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 NID1P14543 1247 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 HOXB9P17482 250 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 NCF2P19878 526 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 KIR2DL2P43627 348 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 CTBP2P56545 445 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 CARD18P57730 90 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 SESN3P58005 492 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 PLAURQ03405 335 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 MERTKQ12866 999 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 FADDQ13158 208 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF239Q16600 458 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 FAM214BQ7L5A3 538 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 BTLAQ7Z6A9 289 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 ATP6V1C2Q8NEY4 427 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 SLC25A43Q8WUT9 341 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 OSTF1Q92882 214 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF524Q96C55 264 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 STARD4Q96DR4 205 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 REXO5Q96IC2 774 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 GMPPAQ96IJ6 420 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 CACYBPQ9HB71 228 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 ACER3Q9NUN7 267 aa15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 DNAJB12Q9NXW2 375 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-208ENST00000550102 A0A0G2JND7 137 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 A8MXE2 369 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 CLIC1O00299 241 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 EFNA2O43921 213 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 SS18L1O75177 396 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 PABPC4LP0CB38 370 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 CD8BP10966 210 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 IL7RP16871 459 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 PPIBP23284 216 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 RYKP34925 604 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 TMEM176BQ3YBM2 270 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 LIN52Q52LA3 116 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 LRIF1Q5T3J3 769 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 MRPL2Q5T653 305 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 PLEKHM3Q6ZWE6 761 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF563Q8TA94 476 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 RNF128Q8TEB7 428 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 SLC38A5Q8WUX1 472 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 CNOT9Q92600 299 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 COQ10BQ9H8M1 238 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 A4GALTQ9NPC4 353 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 SERINC1Q9NRX5 453 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 GLRX2Q9NS18 164 aa15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 SPIN1Q9Y657 262 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-208ENST00000550102 TFPTP0C1Z6 253 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 BMP2P12643 396 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 UQCRBP14927 111 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 KRTAP10-9P60411 292 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 RGNQ15493 299 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 MAPK11Q15759 364 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 GRINAQ7Z429 371 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF440Q8IYI8 595 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 OR6K3Q8NGY3 331 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 TMEM19Q96HH6 336 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 SRXN1Q9BYN0 137 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 OPN3Q9H1Y3 402 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF385DQ9H6B1 395 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 MED4Q9NPJ6 270 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 SLC52A3Q9NQ40 469 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 SLC25A37Q9NYZ2 338 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 CLEC4AQ9UMR7 237 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 PROCRQ9UNN8 238 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 ABCA4P78363 2273 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 AKAP6Q13023 2319 aa15.42■□□□□ 0.06
CHMP1A-208ENST00000550102 CSMD2Q7Z408 3487 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 A0A1W2PP18 115 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CGAP01215 116 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 THBS1P07996 1170 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 APOBEC1P41238 236 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 PCYT1AP49585 367 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 RNPS1Q15287 305 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 SYT14P1Q58G82 188 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 RPS26P11Q5JNZ5 115 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 PAGE3Q5JUK9 113 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 RNF220Q5VTB9 566 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 PRAMEF8Q5VWM4 474 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 PRAMEF7Q5VXH5 474 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 GTF2IRD2BQ6EKJ0 949 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CDH24Q86UP0 819 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms