RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 AP3M1Q9Y2T2 418 aa17.45■□□□□ 0.38
DDX54-207ENST00000550016 USP9YO00507 2555 aaPredicted RBP17.44■□□□□ 0.38
DDX54-207ENST00000550016 PRORSD1PA6NEY8 169 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 CFAP73A6NFT4 308 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 CLCA1A8K7I4 914 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 FAAHO00519 579 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 SEC14L5O43304 696 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 EFNA2O43921 213 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 ADAM11O75078 769 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 SERPINB7O75635 380 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 GP1BBP13224 206 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 AQP1P29972 269 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 PRKAR1BP31321 381 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 PCBP3P57721 371 aaKnown RBP17.44■□□□□ 0.38
DDX54-207ENST00000550016 VMACQ2NL98 169 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 RIPPLY2Q5TAB7 128 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 SEM1Q6ZVN7 128 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 ZNF550Q7Z398 422 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 ARPINQ7Z6K5 226 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 ADGRE4PQ86SQ3 457 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 GGNQ86UU5 652 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 LILRA2Q8N149 483 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 CCDC197Q8NCU1 140 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 ZNF583Q96ND8 569 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 PSMG3-AS1Q96PY0 264 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 CHST2Q9Y4C5 530 aa17.44■□□□□ 0.38
DDX54-207ENST00000550016 SPTAN1Q13813 2472 aaKnown RBP17.44■□□□□ 0.38
DDX54-207ENST00000550016 KDM4EB2RXH2 506 aaPredicted RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 H0YC42 278 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 AP3D1O14617 1153 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 UQCRBP14927 111 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 IL11P20809 199 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 TIMP3P35625 211 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 IDH2P48735 452 aaKnown RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 NUDT2P50583 147 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 TPD52P55327 224 aaPredicted RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 DLX5P56178 289 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 RPS3AP61247 264 aaKnown RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 MERTKQ12866 999 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 EPS8Q12929 822 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 INTS11Q5TA45 600 aaKnown RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 FAM91A1Q658Y4 838 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 DHRS4L2Q6PKH6 230 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 PLEKHM3Q6ZWE6 761 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 BHLHE22Q8NFJ8 381 aaPredicted RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 ASB5Q8WWX0 329 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 SLC35B4Q969S0 331 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 SDCCAG3Q96C92 435 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 REXO5Q96IC2 774 aaKnown RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 RSPO3Q9BXY4 272 aaPredicted RBP17.43■□□□□ 0.38
DDX54-207ENST00000550016 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
DDX54-207ENST00000550016 MBD3L4A6NDZ8 208 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 MBD3L3A6NE82 208 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 MBD3L5A6NJ08 208 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 GJE1A6NN92 205 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 EIF1AYO14602 144 aaKnown RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 GCM2O75603 506 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 MFN2O95140 757 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 OPN1LWP04000 364 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 GKN3PP0CG01 181 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 CEACAM8P31997 349 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 APOBEC1P41238 236 aaKnown RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 ACAA2P42765 397 aaKnown RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 SELENBP1Q13228 472 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 C8orf82Q6P1X6 216 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 ERICH5Q6P6B1 374 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 ESPNLQ6ZVH7 1005 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 GRINAQ7Z429 371 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 PATL1Q86TB9 770 aaKnown RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 ARMC8Q8IUR7 673 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 SLC15A3Q8IY34 581 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 TNIP2Q8NFZ5 429 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 MBD3L2Q8NHZ7 208 aaPredicted RBP17.42■□□□□ 0.38
DDX54-207ENST00000550016 WNT2BQ93097 391 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 TMEM185BQ9H7F4 350 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 SERINC1Q9NRX5 453 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 CMTM6Q9NX76 183 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 CLCF1Q9UBD9 225 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 PTPN13Q12923 2485 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 HCFC1P51610 2035 aa17.42■□□□□ 0.38
DDX54-207ENST00000550016 A0A0G2JNJ9 132 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 A0A0J9YW62 118 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 CCT8L1PA6NM43 557 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 HSPB2A8KAH6 182 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 M0QX08 132 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 ADAMDEC1O15204 470 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 TOXO94900 526 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 IL2RAP01589 272 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 CHRNB4P30926 498 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 SFTPDP35247 375 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 HTR3AP46098 478 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 VEZF1Q14119 521 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 HSPB2Q16082 182 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 SGCBQ16585 318 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 CTU2Q2VPK5 515 aaKnown RBP17.41■□□□□ 0.38
DDX54-207ENST00000550016 PDSS1Q5T2R2 415 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 CCDC80Q76M96 950 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 CCDC71Q8IV32 467 aaPredicted RBP17.41■□□□□ 0.38
DDX54-207ENST00000550016 ATP6V1C2Q8NEY4 427 aa17.41■□□□□ 0.38
DDX54-207ENST00000550016 ADGRG7Q96K78 797 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms