RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SIDT1Q9NXL6 827 aaKnown RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 RCE1Q9Y256 329 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 ATP6V1G2-DDX39BF2Z307 99 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 MAGEB4O15481 346 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 HIST1H1TP22492 207 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CERS1P27544 350 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 BCL6P41182 706 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 DMKNQ6E0U4 476 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PSRC1Q6PGN9 363 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SLC44A3Q8N4M1 653 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ACOT4Q8N9L9 421 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CYB561A3Q8NBI2 242 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ELP4Q96EB1 424 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ELMOD3Q96FG2 381 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SLC35A4Q96G79 324 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PEX11GQ96HA9 241 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PRSS27Q9BQR3 290 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ACTR6Q9GZN1 396 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 OR10A4Q9H209 315 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ADGRL4Q9HBW9 690 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SDHAF2Q9NX18 166 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CALML5Q9NZT1 146 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CHD9Q3L8U1 2897 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PRR23D1E9PI22 279 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 TFP02787 698 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 GYPBP06028 91 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SBK2P0C263 348 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PRR23D2P0DMB1 279 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PRG2P13727 222 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CSNK2A2P19784 350 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 CXCL2P19875 107 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ZP3P21754 424 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-228ENST00000548938 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 GARNL3Q5VVW2 1013 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 UXS1Q8NBZ7 420 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SLC16A11Q8NCK7 471 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 ARSGQ96EG1 525 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 GIMAP5Q96F15 307 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SEC22CQ9BRL7 303 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 AIFM2Q9BRQ8 373 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SARGQ9BW04 601 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 PCBD2Q9H0N5 130 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 WDR26Q9H7D7 661 aa12.72□□□□□ -0.37
HDAC7-228ENST00000548938 SYNDIG1LA6NDD5 238 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 SLC22A31A6NKX4 558 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-228ENST00000548938 VEGFDO43915 354 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 PPM1BO75688 479 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-228ENST00000548938 F3P13726 295 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF136P52737 540 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 TAS2R43P59537 309 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 TEAD2Q15562 447 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 NHLRC3Q5JS37 347 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 FAM122CQ6P4D5 195 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 FAM111BQ6SJ93 734 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 SLITRK4Q8IW52 837 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 LNX2Q8N448 690 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 OR13C2Q8NGS9 318 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 HERVK_113Q902F9 699 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 CDS1Q92903 461 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 MS4A6EQ96DS6 147 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 CXorf58Q96LI9 332 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 CD180Q99467 661 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 IFT27Q9BW83 186 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 SLC7A5P2Q9GIP4 190 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 CA10Q9NS85 328 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 KIF25Q9UIL4 384 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-228ENST00000548938 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-228ENST00000548938 AK6Q9Y3D8 172 aaKnown RBP12.71□□□□□ -0.37
HDAC7-228ENST00000548938 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
HDAC7-228ENST00000548938 FLRT2O43155 660 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 SERPINI2O75830 405 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 BMP7P18075 431 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.38
HDAC7-228ENST00000548938 EPHA4P54764 986 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 NRG3P56975 720 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 FOXK2Q01167 660 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 BAMBIQ13145 260 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms