RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 TMEM237Q96Q45 408 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 KLHDC3Q9BQ90 382 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 CRNKL1Q9BZJ0 848 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 POLR2J2Q9GZM3 115 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 POLR2J3Q9H1A7 115 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 BTNL2Q9UIR0 455 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 RNF6Q9Y252 685 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 TP53TG5Q9Y2B4 290 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 SLCO1B1Q9Y6L6 691 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 DOPEY1Q5JWR5 2465 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 UTRNP46939 3433 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 TRIM64A6NGJ6 449 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 TRIM64BA6NI03 449 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 GJE1A6NN92 205 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 TMX2-CTNND1H3BSU7 103 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 GFYI3L273 518 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 KIF2AO00139 706 aaPredicted RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 SSX5O60225 188 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 FAM189A1O60320 539 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 ZNF324O75467 553 aaPredicted RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 SLITRK3O94933 977 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 SNAPINO95295 136 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 WISP3O95389 354 aaPredicted RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 PTBP3O95758 552 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 MT-ND3P03897 115 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 IGF1P05019 195 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 CLUP10909 449 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 PAICSP22234 425 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 PTGFRP43088 359 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 STARD6P59095 220 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 SLC5A12Q1EHB4 618 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 RFLNAQ6ZTI6 216 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 ZNF429Q86V71 674 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 CBWD2Q8IUF1 395 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 NRMQ8IXM6 262 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 MDS2Q8NDY4 140 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 OR5AU1Q8NGC0 362 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 OR52B4Q8NGK2 314 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 GIPC3Q8TF64 312 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 DNAJA4Q8WW22 397 aaPredicted RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 MRPL38Q96DV4 380 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 SLC30A2Q9BRI3 323 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 PLA2G2FQ9BZM2 168 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 RAB17Q9H0T7 212 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 VCXQ9H320 206 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 RDH8Q9NYR8 311 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 MTRF1LQ9UGC7 380 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 PRPF19Q9UMS4 504 aaKnown RBP1.33□□□□□ -2.2
CEP290-204ENST00000547926 NEUROG3Q9Y4Z2 214 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 OARD1Q9Y530 152 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
CEP290-204ENST00000547926 ABCC9O60706 1549 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 LRP4O75096 1905 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 PTCH1Q13635 1447 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 VSTM2BA6NLU5 285 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 OR10H3O60404 316 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 B3GAT3O94766 335 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 MOSP00540 346 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 RPS2P15880 293 aaKnown RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 COX7A1P24310 79 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 BIDP55957 195 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 TRIP10Q15642 601 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 FAHD2BQ6P2I3 314 aaPredicted RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 ARSKQ6UWY0 536 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 APTXQ7Z2E3 356 aaKnown RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 ZNF561Q8N587 486 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 CHCHD10Q8WYQ3 142 aaPredicted RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 TMEM158Q8WZ71 300 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 PINX1Q96BK5 328 aaKnown RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 FAHD2AQ96GK7 314 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 PGLYRP4Q96LB8 373 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 SCRT1Q9BWW7 348 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 ECT2Q9H8V3 914 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 POLD4Q9HCU8 107 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 AIG1Q9NVV5 245 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 NINJ2Q9NZG7 142 aa1.32□□□□□ -2.2
CEP290-204ENST00000547926 WARS2Q9UGM6 360 aaKnown RBP1.32□□□□□ -2.2
CEP290-204ENST00000547926 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.31□□□□□ -2.2
CEP290-204ENST00000547926 IGKV2-28A0A075B6P5 120 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 LANCL1O43813 399 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 TNFSF13O75888 250 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 GNA14O95837 355 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 IGKV2D-28P01615 120 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 OPN1LWP04000 364 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 RBMY1CP0DJD4 496 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 RNH1P13489 461 aaKnown RBP1.31□□□□□ -2.2
CEP290-204ENST00000547926 DPP4P27487 766 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 NMT1P30419 496 aaKnown RBP1.31□□□□□ -2.2
CEP290-204ENST00000547926 CD80P33681 288 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 ADRA1AP35348 466 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 MTTPP55157 894 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 PFN3P60673 137 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 RIPPLY1Q0D2K3 151 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 CCDC173Q0VFZ6 552 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 RAB40BQ12829 278 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 ARFRP1Q13795 201 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 KCTD19Q17RG1 926 aaPredicted RBP1.31□□□□□ -2.2
CEP290-204ENST00000547926 ISLR2Q6UXK2 745 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 TICAM2Q86XR7 235 aa1.31□□□□□ -2.2
CEP290-204ENST00000547926 PNKDQ8N490 385 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms