RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 ZNF440Q8IYI8 595 aa20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 FNDC9Q8TBE3 224 aa20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 ZNF845Q96IR2 970 aaPredicted RBP20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 DNAJB12Q9NXW2 375 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 LEF1Q9UJU2 399 aaPredicted RBP20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 PACSIN3Q9UKS6 424 aa20.88■□□□□ 0.93
CTDSP2-203ENST00000547701 CDHR4A6H8M9 788 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 TMEM247A6NEH6 219 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 A8MXE2 369 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 CD8BP10966 210 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 IL7RP16871 459 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 MDH1P40925 334 aaKnown RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 KIR2DL2P43627 348 aaPredicted RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 SGCBQ16585 318 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 CGB2Q6NT52 195 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 P4HA3Q7Z4N8 544 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 KIF18BQ86Y91 864 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 SLC25A43Q8WUT9 341 aaPredicted RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 WDR60Q8WVS4 1066 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 CPNE4Q96A23 557 aaPredicted RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 STARD4Q96DR4 205 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 ZNF317Q96PQ6 595 aaPredicted RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 CCDC106Q9BWC9 280 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 TMEM120AQ9BXJ8 343 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 QRSL1Q9H0R6 528 aaKnown RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 TMEM38AQ9H6F2 299 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 TIGARQ9NQ88 270 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 FGFR1OP2Q9NVK5 253 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 MCTS1Q9ULC4 181 aaKnown RBP20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 NDUFAF1Q9Y375 327 aa20.87■□□□□ 0.93
CTDSP2-203ENST00000547701 BCAS1O75363 584 aaPredicted RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 CGAP01215 116 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 PABPC4LP0CB38 370 aaKnown RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 ETS2P15036 469 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 HTR3AP46098 478 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 EIF1AXP47813 144 aaKnown RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 CLK1P49759 484 aaKnown RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 GUCY1A3Q02108 690 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 COQ5Q5HYK3 327 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 HBMQ6B0K9 141 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 GTF2IRD2BQ6EKJ0 949 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 C3orf33Q6P1S2 294 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 FAM214BQ7L5A3 538 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 GRINAQ7Z429 371 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 GTF2IRD2Q86UP8 949 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 TMCO5AQ8N6Q1 288 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 SMPDL3BQ92485 455 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 OSTF1Q92882 214 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 THOC1Q96FV9 657 aaKnown RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 TMEM19Q96HH6 336 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 GMPPAQ96IJ6 420 aaPredicted RBP20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 IFT52Q9Y366 437 aa20.86■□□□□ 0.93
CTDSP2-203ENST00000547701 LRBAP50851 2863 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 CREBBPQ92793 2442 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 ADAM11O75078 769 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 AQP8O94778 261 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 BCHEP06276 602 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 ARAFP10398 606 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 CD1EP15812 388 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 ARFIP2P53365 341 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 CARD18P57730 90 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 RAC3P60763 192 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 LIN52Q52LA3 116 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 RUNDC3AQ59EK9 446 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 MRPL2Q5T653 305 aaKnown RBP20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 PLEKHM3Q6ZWE6 761 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 OR52P1PQ8NH57 321 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 CNOT9Q92600 299 aaKnown RBP20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 COQ10BQ9H8M1 238 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 SERINC1Q9NRX5 453 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 KLHL14Q9P2G3 628 aa20.85■□□□□ 0.93
CTDSP2-203ENST00000547701 ABCA4P78363 2273 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 FAM221AA4D161 298 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 CLDN24A6NM45 220 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 EVPLLA8MZ36 301 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 TNFSF11O14788 317 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 CXCL13O43927 109 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 SS18L1O75177 396 aaPredicted RBP20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 GOSR1O95249 250 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 NPPAP01160 153 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 SNRPB2P08579 225 aaKnown RBP20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 SHC1P29353 583 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 RNF144AP50876 292 aaPredicted RBP20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 CCR4P51679 360 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 PLXDC2Q6UX71 529 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 GCNT2Q8N0V5 402 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 BBS10Q8TAM1 723 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 MCCC2Q9HCC0 563 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 PLSCR4Q9NRQ2 329 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 ZNF232Q9UNY5 417 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 TACC2O95359 2948 aa20.84■□□□□ 0.93
CTDSP2-203ENST00000547701 SLC22A2O15244 555 aa20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 PGM3O95394 542 aa20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 SYNGR4O95473 234 aa20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 VIMP08670 466 aaKnown RBP20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 EPS8Q12929 822 aa20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 LARS2Q15031 903 aaKnown RBP20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 ZNF239Q16600 458 aaKnown RBP20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 TMEM176BQ3YBM2 270 aaPredicted RBP20.83■□□□□ 0.93
CTDSP2-203ENST00000547701 RETREG3Q86VR2 466 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms