RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CDC40O60508 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ICOSLGO75144 302 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 STK17BO94768 372 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 MT-CO3P00414 261 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 IFNGP01579 166 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 TP53P04637 393 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 FUT4P22083 530 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ITPKBP27987 946 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 GPR4P46093 362 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 P2RX1P51575 399 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 PRPS1P60891 318 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ST3GAL4Q11206 333 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 TBCEQ15813 527 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 CNPY1Q3B7I2 92 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ARMC4Q5T2S8 1044 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 PLAG1Q6DJT9 500 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 NDUFAF7Q7L592 441 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 GLRX5Q86SX6 157 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 CLVS1Q8IUQ0 354 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ESX1Q8N693 406 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 POGLUT1Q8NBL1 392 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 GALNT6Q8NCL4 622 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 OR13F1Q8NGS4 319 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 RAB2BQ8WUD1 216 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 UBE2FQ969M7 185 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 MUL1Q969V5 352 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 IL4I1Q96RQ9 567 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 CDCA4Q9BXL8 241 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 GPR87Q9BY21 358 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 CXorf56Q9H5V9 222 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ZBTB20Q9HC78 741 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 PTTG2Q9NZH5 202 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 MYOTQ9UBF9 498 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 WARS2Q9UGM6 360 aaKnown RBP12.32□□□□□ -0.44
PTCH1-215ENST00000547672 CARD8Q9Y2G2 431 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
PTCH1-215ENST00000547672 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 A0A1W2PQ72 361 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 PLD2O14939 933 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 PRODHO43272 600 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 MAN1A2O60476 641 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 HIST1H2ABP04908 130 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 PAICSP22234 425 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 CXCR1P25024 350 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 DCKP27707 260 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 EVI2BP34910 448 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 CCR4P51679 360 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 EFNB1P98172 346 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 SSPNQ14714 243 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 XAF1Q6GPH4 301 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ACSM5Q6NUN0 579 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 OPN5Q6U736 354 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 KIRREL2Q6UWL6 708 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 HIST3H2AQ7L7L0 130 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ERI1Q8IV48 349 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 LNX2Q8N448 690 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 B4GALNT2Q8NHY0 566 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 FANK1Q8TC84 345 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 HIST1H2ACQ93077 130 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ARSGQ96EG1 525 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 SECISBP2Q96T21 854 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 GPA33Q99795 319 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 WDR77Q9BQA1 342 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 DPH1Q9BZG8 443 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ADAM19Q9H013 955 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 RBM38Q9H0Z9 239 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 OR52D1Q9H346 318 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 UBQLN3Q9H347 655 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 MMP25Q9NPA2 562 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 MRPS18AQ9NVS2 196 aaKnown RBP12.31□□□□□ -0.44
PTCH1-215ENST00000547672 ERGIC3Q9Y282 383 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
PTCH1-215ENST00000547672 IGHV1-45A0A0A0MS14 117 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 IGHV3-20A0A0C4DH32 117 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 RIIAD1A6NNX1 92 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 C4orf47A7E2U8 309 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 C21orf140B9A014 251 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 AGRPO00253 132 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ENTPD6O75354 484 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 PTP4A3O75365 173 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SLC25A12O75746 678 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 NDUFB2O95178 105 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 NUDT14O95848 222 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 FADS2O95864 444 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF28P17035 718 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms