RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 APOOLQ6UXV4 268 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 HMGN2P46Q86SG4 172 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 GTF2IRD2Q86UP8 949 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 SLC22A16Q86VW1 577 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 CALHM3Q86XJ0 350 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 KRT73Q86Y46 540 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 MISPQ8IVT2 679 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 SLC30A8Q8IWU4 369 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 SLC15A3Q8IY34 581 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 DEFB107AQ8IZN7 70 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 TMCO5AQ8N6Q1 288 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 METTL25Q8N6Q8 603 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 GATSQ8NAP1 163 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 HIPK4Q8NE63 616 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 FAM71CQ8NEG0 241 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 OR2T12Q8NG77 320 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 WDR60Q8WVS4 1066 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 DACT3Q96B18 629 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 NTNG2Q96CW9 530 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 NSL1Q96IY1 281 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 JSRP1Q96MG2 331 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 TAAR6Q96RI8 345 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 KCTD14Q9BQ13 255 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 ECSITQ9BQ95 431 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 RTN4RQ9BZR6 473 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 PIF1Q9H611 641 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 CACYBPQ9HB71 228 aaKnown RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 BCL2L10Q9HD36 194 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 OLAHQ9NV23 265 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 TUBA8Q9NY65 449 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 PPP4R1LQ9P1A2 415 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 KCNE5Q9UJ90 142 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 USP22Q9UPT9 525 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF443Q9Y2A4 671 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 NTNG1Q9Y2I2 539 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 C15orf41Q9Y2V0 281 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 DTNAQ9Y4J8 743 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.76□□□□□ -1.49
PRKDC-211ENST00000546304 PCNX1Q96RV3 2341 aa5.76□□□□□ -1.49
PRKDC-211ENST00000546304 GCN1Q92616 2671 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 IGLV3-32A0A0A0MS00 114 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 A0A0G2JPF8 293 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ELOVL7A1L3X0 281 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SERINC4A6NH21 518 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CLDN24A6NM45 220 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 EIF4E1BA6NMX2 242 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 B2RBV5 119 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HNRNPCL2B2RXH8 293 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 B4DXG7 233 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HNRNPCL3B7ZW38 293 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HCRTR2O43614 444 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HNRNPCL1O60812 293 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 BCAS1O75363 584 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 C1QL1O75973 258 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 PDE9AO76083 593 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CSTAP01040 98 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CRYABP02511 175 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 DBIP07108 87 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 UBTFL6P0CB48 400 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HNRNPCL4P0DMR1 293 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ETS2P15036 469 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CNR1P21554 472 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 GDF1P27539 372 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 MAGEA5P43359 124 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CCR4P51679 360 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SUMO3P55854 103 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 EEFSECP57772 596 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF117Q03924 483 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SKP2Q13309 424 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 FGFBP1Q14512 234 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 GANABQ14697 944 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 INPP5JQ15735 1006 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 MAPK14Q16539 360 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 FXNQ16595 210 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HYAL4Q2M3T9 481 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 NDUFAF6Q330K2 333 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 DNAL1Q4LDG9 190 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 LRRC23Q53EV4 343 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 KLHL26Q53HC5 615 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 EIPR1Q53HC9 387 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SOWAHCQ53LP3 525 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SAMD4BQ5PRF9 694 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 MRPL2Q5T653 305 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 INTS11Q5TA45 600 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 RNF220Q5VTB9 566 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 AP1ARQ63HQ0 302 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 TIGD3Q6B0B8 471 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 OR5M10Q6IEU7 315 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF836Q6ZNA1 936 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 EIF3MQ7L2H7 374 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 MARCH3Q86UD3 253 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 IFNEQ86WN2 208 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 PLCZ1Q86YW0 608 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SIAH3Q8IW03 269 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 CMIPQ8IY22 773 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 PEX5LQ8IYB4 626 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 MICU2Q8IYU8 434 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 FAM109AQ8N4B1 249 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms